Miyakogusa Predicted Gene

chr2.CM0904.170.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0904
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7QG18_VITVI 519 78.4 88.9 (tr|A7QG18) Chromosome undetermined scaffold_91, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037665001 PE=4 SV=1
TAIR_pep AT5G23880.1 482 71.1 86.7 | Symbols: EMB1265, CPSF100, ESP5, ATCPSF100 | ATCPSF100/CPSF100/EMB1265/ESP5 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR); DNA binding / protein binding | chr5:8052553-8058150 FORWARD
Medicago IMGA|AY515253_16.4 45.8 30.6 48.8 RNA-metabolising metallo-beta-lactamase chr02_pseudomolecule_IMGAG_V2 484801-482598 E EGN_Mt071002 20080227
Soybean Glyma08g20140.1 48.1 28.3 50.0  
3' Unigene BP069709 500 96.4 96.4 GNf032f02
A list of protein families, domains and functional sites (searches in InterPro)
chr2.CM0904.170.nd length: 514 aa.
no_ID  
method AccNumber shortName E-value location
Coil coil coiled-coil NA 340-361
HMMPanther PTHR11203 CLEAVAGE 1.5e-91 201-514
HMMPanther PTHR11203:SF5 CLEAVAGE 1.5e-91 201-514
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr2.CM0904.170.nd 514 0.007 0.317 0.131 0.383 _ 5
Wolf-PSORT
chr2.CM0904.170.nd	chlo 11, nucl 1, cyto 1, vacu 1, cyto_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr2.CM0904.170.nd Not targeted -36.889 -3.821 -6.208 46.09% -26.860