Miyakogusa Predicted Gene

chr2.CM0405.50.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0405
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7PIU1_VITVI 444 51.6 64.0 (tr|A7PIU1) Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018474001 PE=4 SV=1
TAIR_pep AT3G55480.2 352 42.2 56.6 | Symbols: | adaptin family protein | chr3:20577350-20581607 REVERSE
Medicago IMGA|CR962128_25.4 649 71.0 77.7 Adaptin, N-terminal chr05_pseudomolecule_IMGAG_V2 28262257-28251984 E EGN_Mt071002 20080227
Soybean Glyma02g41570.1 676 72.9 79.6  
Lotus Consensus KMC000675A_C01 252 96.6 96.6 KMC000675A_c01
3' Unigene KMC000675A_C01 252 96.6 96.6 KMC000675A_c01
5' Unigene AV425807 708 99.2 99.2 MWM059b05_r
A list of protein families, domains and functional sites (searches in InterPro)
chr2.CM0405.50.nd length: 611 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR11134 ADAPTER-RELATED 1.3e-34 132-608
HMMPanther PTHR11134:SF1 ADAPTER-RELATED 1.3e-34 132-608
Seg seg seg NA 258-276
279-298
439-451
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr2.CM0405.50.nd 611 0.031 0.312 0.180 0.515 _ 4
Wolf-PSORT
chr2.CM0405.50.nd	nucl 7, cyto 5, chlo 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr2.CM0405.50.nd Not targeted -14.019 -0.933 -2.210 6.49% -10.876