Miyakogusa Predicted Gene

chr2.CM0323.80.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0323
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A5BVF6_VITVI 327 45.8 59.5 (tr|A5BVF6) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027632 PE=4 SV=1
TAIR_pep AT4G37210.1 205 46.0 62.7 | Symbols: | tetratricopeptide repeat (TPR)-containing protein | chr4:17512370-17514415 FORWARD
Medicago IMGA|CU459034_22.3 493 61.5 70.0 Prefoldin chr05_pseudomolecule_IMGAG_V2 6819369-6823076 E EGN_Mt071002 20080227
Soybean Glyma01g38800.1 518 63.4 70.3  
3' Unigene BP052847 995 99.6 99.6 SPDL014b08_f
A list of protein families, domains and functional sites (searches in InterPro)
chr2.CM0323.80.nc length: 442 aa.
IPR001440 Tetratricopeptide TPR_1
method AccNumber shortName E-value location
HMMPfam PF00515 TPR_1 0.051 68-101
238-271
IPR013026 Tetratricopeptide region
HMMSmart SM00028 no description 0.91 68-101
238-271
no_ID  
Coil coil coiled-coil NA 244-272
315-343
HMMPanther PTHR15081 NUCLEAR 1.7e-36 213-442
HMMPanther PTHR15081:SF1 HISTONE 1.7e-36 213-442
Seg seg seg NA 156-171
193-215
superfamily SSF48452 TPR-like 1.7e-10 64-285
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr2.CM0323.80.nc 442 0.365 0.046 0.150 0.751 _ 4
Wolf-PSORT
chr2.CM0323.80.nc	nucl 7, chlo 3, cyto 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr2.CM0323.80.nc Not targeted -36.600 0 -6.911 45.42% -29.689