Miyakogusa Predicted Gene

chr2.CM0304.560.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0304
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A5AY41_VITVI 300 44.7 53.7 (tr|A5AY41) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004395 PE=4 SV=1
TAIR_pep AT4G11740.1 217 40.6 51.4 | Symbols: SAY1 | SAY1 | chr4:7071949-7075250 FORWARD
Soybean Glyma05g03480.1 498 60.9 67.1  
Lotus Consensus KMC014822A_C01 385 99.5 99.5 KMC014822A_c01
3' Unigene KMC014822A_C01 799 99.8 99.8 KMC014822A_c01
5' Unigene AV410901 383 100.0 100.0 MWL080c11_r
A list of protein families, domains and functional sites (searches in InterPro)
chr2.CM0304.560.nd length: 495 aa.
IPR003903 Ubiquitin interacting motif
method AccNumber shortName E-value location
HMMPfam PF02809 UIM 1.2 218-235
255-272
HMMSmart SM00726 no description 34 219-238
256-275
IPR009060 UBA-like
superfamily SSF46934 UBA-like 0.00064 1-47
no_ID  
Coil coil coiled-coil NA 452-494
HMMPanther PTHR23322 FAS-ASSOCIATED 2.8e-92 19-232
257-491
HMMPanther PTHR23322:SF3 ARA4-INTERACTING 2.8e-92 19-232
257-491
Seg seg seg NA 169-183
219-237
332-345
426-436
459-491
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr2.CM0304.560.nd 495 0.132 0.122 0.180 0.556 _ 4
Wolf-PSORT
chr2.CM0304.560.nd	nucl 11, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr2.CM0304.560.nd Not targeted -32.737 -1.852 -15.842 36.51% -15.043