| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | A7QKD3_VITVI | 748 | 58.1 | 69.7 | (tr|A7QKD3) Chromosome chr2 scaffold_112, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001071001 PE=4 SV=1 |
| TAIR_pep | AT4G11860.1 | 348 | 69.2 | 79.6 | | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G22960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63644.1); contains InterPro domain Protein of unknown function DUF544 (InterPro:IPR007518); contains InterPro domain Ubiquitin interacting motif (InterPro:IPR003903) | chr4:7134231-7138355 REVERSE |
| Medicago | IMGA|CU326392_8.3 | 977 | 74.3 | 81.1 | Ubiquitin interacting motif chr05_pseudomolecule_IMGAG_V2 2931615-2925449 E EGN_Mt071002 20080227 |
| Soybean | Glyma01g42400.1 | 1012 | 74.4 | 82.2 | |
| 3' Unigene | AV767602 | 541 | 100.0 | 100.0 | MWM188b01_f |
| 5' Unigene | AV420932 | 274 | 100.0 | 100.0 | MWM188b01_r |
| chr2.CM0304.430.nc | length: 720 aa. | |||
| IPR007518 | Protein of unknown function DUF544 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPanther | PTHR18063 | NF-E2 | 1.2e-66 | 28-229 |
| HMMPfam | PF04424 | DUF544 | 1.7e-64 | 58-185 |
| no_ID | ||||
| Seg | seg | seg | NA | 3-11 59-69 700-707 |
| Name | Length | cTP | mTP | SP | other | Loc. | RC |
|---|---|---|---|---|---|---|---|
| chr2.CM0304.430.nc | 720 | 0.702 | 0.027 | 0.031 | 0.566 | C | 5 |
chr2.CM0304.430.nc nucl 10, cyto 2, vacu 1, cysk 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| chr2.CM0304.430.nc | Not targeted | -21.473 | 0 | -5.128 | 15.02% | -16.345 |