| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | A7QIW8_VITVI | 699 | 65.2 | 78.5 | (tr|A7QIW8) Chromosome chr2 scaffold_105, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000421001 PE=4 SV=1 |
| TAIR_pep | AT4G11560.1 | 578 | 57.8 | 71.8 | | Symbols: | bromo-adjacent homology (BAH) domain-containing protein | chr4:7000089-7003439 REVERSE |
| Medicago | IMGA|CT573507_21.5 | 852 | 76.3 | 88.6 | Bromo adjacent region; Transcription elongation factor S-II, central region chr05_pseudomolecule_IMGAG_V2 2396372-2391182 F EGN_Mt071002 20080227 |
| Soybean | Glyma08g01770.1 | 813 | 74.8 | 84.3 | |
| Lotus Consensus | KMC004470A_C01 | 605 | 100.0 | 100.0 | KMC004470A_c01 |
| 3' Unigene | KMC004470A_C01 | 1059 | 99.6 | 99.6 | KMC004470A_c01 |
| 5' Unigene | AV429062 | 285 | 98.7 | 98.7 | MWM119h05_r |
| chr2.CM0304.1000.nc | length: 605 aa. | |||
| IPR001025 | Bromo adjacent region | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003677 | DNA binding | ||
| HMMPfam | PF01426 | BAH | 7.9e-19 | 111-230 |
| HMMSmart | SM00439 | no description | 1.8e-21 | 111-230 |
| ProfileScan | PS51038 | BAH | 19.806 | 111-230 |
| IPR003618 | Transcription elongation factor S-II, central region | |||
| Biological Process | GO:0006350 | transcription | ||
| HMMSmart | SM00510 | no description | 2.1e-09 | 366-471 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 44-74 |
| HMMPanther | PTHR11477 | TRANSCRIPTION | 2.9e-05 | 420-523 |
| Seg | seg | seg | NA | 20-35 36-75 |
| superfamily | SSF46942 | Elongation | 6.4e-11 | 396-465 |
| Name | Length | cTP | mTP | SP | other | Loc. | RC |
|---|---|---|---|---|---|---|---|
| chr2.CM0304.1000.nc | 605 | 0.126 | 0.122 | 0.132 | 0.876 | _ | 2 |
chr2.CM0304.1000.nc nucl 10, chlo 3
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| chr2.CM0304.1000.nc | Not targeted | -32.716 | -0.027 | -4.167 | 36.46% | -28.522 |