Miyakogusa Predicted Gene

chr2.CM0120.50.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0120
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL A7QUR3_VITVI 824 64.3 74.9 (tr|A7QUR3) Chromosome chr1 scaffold_180, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006949001 PE=4 SV=1
TAIR_pep AT5G43400.1 736 55.8 67.3 | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G13210.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G24780.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G43390.1); similar to hypothetical protein OsI_005960 [Oryza sativa (indica cultivar-group)] (GB:EAY84727.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70061.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69580.1); contains InterPro domain Uncharacterized conserved protein UCP015417, vWA (InterPro:IPR011205) | chr5:17443410-17445377 REVERSE
Medicago IMGA|CU137656_6.4 938 71.0 78.8 Protein of unknown function T31B5_30_vWA chr05_pseudomolecule_IMGAG_V2 18194712-18192533 E EGN_Mt071002 20080227
Soybean Glyma01g07690.1 925 72.7 81.7  
3' Unigene AV767196 329 100.0 100.0 MWM159g12_f
5' Unigene AV422466 803 98.6 98.6 MWM014h11_r
A list of protein families, domains and functional sites (searches in InterPro)
chr2.CM0120.50.nc length: 643 aa.
IPR011205 Protein of unknown function T31B5_30_vWA
method AccNumber shortName E-value location
HMMPIR PIRSF015417 Uncharacterised 0 2-643
no_ID  
Coil coil coiled-coil NA 206-253
Seg seg seg NA 12-26
198-218
221-244
superfamily SSF53300 vWA-like 0.00025 437-546
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr2.CM0120.50.nc 643 0.393 0.058 0.034 0.790 _ 4
Wolf-PSORT
chr2.CM0120.50.nc	chlo 9, cyto 2, cysk 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr2.CM0120.50.nc Not targeted -47.946 0 -11.440 70.58% -36.506