Miyakogusa Predicted Gene

chr2.CM0021.1090.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0021
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A3C7E5_ORYSJ 884 46.5 62.1 (tr|A3C7E5) Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_031217 PE=4 SV=1
TAIR_pep AT4G17140.1 1124 57.8 71.0 | Symbols: | pleckstrin homology (PH) domain-containing protein | chr4:9613629-9636629 REVERSE
Medicago IMGA|CR931736_45.4 1375 79.2 86.0 C2 calcium/lipid-binding region, CaLB chr05_pseudomolecule_IMGAG_V2 4344015-4355333 H EGN_Mt071002 20080227
Soybean Glyma11g04260.1 1557 80.7 86.0  
3' Unigene BP064214 75.8 88.5 88.5 GENLf036a11
A list of protein families, domains and functional sites (searches in InterPro)
chr2.CM0021.1090.nc length: 1011 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR17204 PRE-MRNA 0.00025 409-449
HMMPanther PTHR17204:SF7 PRE-MRNA 0.00025 409-449
Seg seg seg NA 24-39
218-227
440-458
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 23
25 47
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr2.CM0021.1090.nc 1011 0.011 0.100 0.777 0.365 S 3
Wolf-PSORT
chr2.CM0021.1090.nc	nucl 5, plas 3, cyto 2, E.R. 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr2.CM0021.1090.nc Not targeted -55.496 -2.466 -4.146 83.23% -48.884