Miyakogusa Predicted Gene

chr1.CM0955.30.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0955
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7PKP0_VITVI 151 44.2 63.0 (tr|A7PKP0) Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019256001 PE=4 SV=1
TAIR_pep AT3G45750.1 112 43.3 63.0 | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G45760.1); similar to hypothetical protein OsJ_027139 [Oryza sativa (japonica cultivar-group)] (GB:EAZ43656.1); similar to Os08g0559900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062505.1); contains domain SSF81631 (SSF81631); contains domain PTHR12271:SF13 (PTHR12271:SF13); contains domain PTHR12271 (PTHR12271); contains domain SSF81301 (SSF81301) | chr3:16804840-16808365 REVERSE
Soybean Glyma06g16630.1 129 78.2 87.2  
Lotus Consensus KMC005960A_C01 634 100.0 100.0 KMC005960A_c01
3' Unigene KMC005960A_C01 1047 99.8 99.8 KMC005960A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr1.CM0955.30.nd length: 297 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR12271 POLY(A) 4.3e-12 7-122
HMMPanther PTHR12271:SF13 ZINC 4.3e-12 7-122
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr1.CM0955.30.nd 297 0.085 0.100 0.239 0.938 _ 2
Wolf-PSORT
chr1.CM0955.30.nd	nucl 10, chlo 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr1.CM0955.30.nd Not targeted -23.815 0 -3.297 18.70% -20.518