Miyakogusa Predicted Gene

CM0385.340.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0385
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7Q8L2_VITVI 998 91.3 96.0 (tr|A7Q8L2) Chromosome chr5 scaffold_64, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00033097001 PE=4 SV=1
TAIR_pep AT3G06720.2 922 83.5 92.7 | Symbols: ATKAP ALPHA, AT-IMP | AT-IMP (Arabidopsis thaliana importin alpha); protein transporter | chr3:2120565-2123561 FORWARD
Medicago IMGA|AC191599_15.4 1026 95.1 97.9 Importin alpha-like protein, beta-binding region chr02_pseudomolecule_IMGAG_V2 8341979-8337819 E EGN_Mt071002 20080227
Soybean Glyma15g15480.1 1054 95.9 98.7  
Lotus Consensus KMC014706A_C01 113 85.4 85.4 KMC014706A_c01
3' Unigene KMC014706A_C01 113 85.4 85.4 KMC014706A_c01
5' Unigene AV409921 131 95.1 95.1 MWL064d07_r
A list of protein families, domains and functional sites (searches in InterPro)
CM0385.340.nd length: 531 aa.
IPR000225 Armadillo
method AccNumber shortName E-value location
HMMPfam PF00514 Arm 2e-07 106-147
149-189
191-232
234-273
275-315
317-358
360-400
403-443
HMMSmart SM00185 no description 2.8e-06 106-147
149-189
190-232
234-273
275-315
317-358
360-400
403-443
ProfileScan PS50176 ARM_REPEAT 9.152 160-202
117-160
244-286
328-371
371-399
IPR002652 Importin alpha-like protein, beta-binding region
Biological Process GO:0006606 protein import into nucleus    
Biological Process GO:0006886 intracellular protein transport    
Molecular Function GO:0008565 protein transporter activity    
HMMPfam PF01749 IBB 9.1e-41 4-97
no_ID  
Gene3D 1.25.10.10 no description 5.2e-145 74-496
HMMPanther PTHR23316 IMPORTIN 1.8e-275 1-530
superfamily SSF48371 ARM 4.3e-107 23-496
Wolf-PSORT
CM0385.340.nd	nucl 7, mito 3.5, nucl_plas 3.5, cyto_mito 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
CM0385.340.nd Not targeted -45.207 -0.033 -8.521 64.99% -36.653