Miyakogusa Predicted Gene
- chr1.CM0375.440.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr1.CM0375.440.nc - phase: 0
(540 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC183923_8.4 Bromodomain chr02_pseudomolecule_IMGAG_V2 5678... 70 2e-12
IMGA|CU179894_3.4 Bromodomain chr05_pseudomolecule_IMGAG_V2 3394... 69 7e-12
IMGA|CT962504_23.4 Bromodomain chr03_pseudomolecule_IMGAG_V2 118... 66 3e-11
IMGA|AC151949_24.4 Bromodomain chr08_pseudomolecule_IMGAG_V2 486... 64 2e-10
IMGA|AC174355_27.4 Bromodomain chr08_pseudomolecule_IMGAG_V2 169... 60 3e-09
IMGA|AC135231_1.4 Bromodomain chr04_pseudomolecule_IMGAG_V2 2291... 59 4e-09
IMGA|AC136139_29.5 Bromodomain chr08_pseudomolecule_IMGAG_V2 446... 57 2e-08
IMGA|CR962137_24.4 Bromodomain chr05_pseudomolecule_IMGAG_V2 234... 55 6e-08
IMGA|AC202375_13.3 Bromodomain chr04_pseudomolecule_IMGAG_V2 265... 50 3e-06
IMGA|AC144564_66.4 Bromodomain chr04_pseudomolecule_IMGAG_V2 265... 50 3e-06
IMGA|AC202375_11.3 Bromodomain chr04_pseudomolecule_IMGAG_V2 265... 49 5e-06
IMGA|AC140550_58.4 Bromodomain chr02_pseudomolecule_IMGAG_V2 325... 49 5e-06
IMGA|AC144564_64.4 Bromodomain chr04_pseudomolecule_IMGAG_V2 265... 49 7e-06
>IMGA|AC183923_8.4 Bromodomain chr02_pseudomolecule_IMGAG_V2
5678377-5673610 E EGN_Mt071002 20080227
Length = 520
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 438 SLLKSMHDHADAWPFKEPVD--GRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVA 495
++LK + H +W FK PVD ++PDY+ +I PMDL T+ +++ YY + E F A
Sbjct: 85 TILKCLISHPYSWVFKTPVDPVALNIPDYFTVISHPMDLGTIKFKLDKNIYY-SKEEFAA 143
Query: 496 DVRRMFANARTYNSPETIYYKCASRLEAHFQSK 528
DVR F+NA TYN P + A L F+ K
Sbjct: 144 DVRLTFSNAMTYNPPSNDVHLMAKELNKLFERK 176
>IMGA|CU179894_3.4 Bromodomain chr05_pseudomolecule_IMGAG_V2
33944783-33934915 E EGN_Mt071002 20080227
Length = 959
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 14/129 (10%)
Query: 395 IDDIPGLREAGWTPDQWGHSRFRSLSGCTDNATNQKHLTAFMRSLLKSMHDHADAWP-FK 453
+DD GL TP ++LSG +++ L + L K D + +
Sbjct: 173 VDDSKGLHSVTGTP-------LKALSGIPLPLPDKRTLELILDKLQKK-----DTYGVYA 220
Query: 454 EPVDGRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFANARTYNSPETI 513
EPVD ++PDY+D+I +PMD T+ K++ + Y T E F +DV + +NA YNS +TI
Sbjct: 221 EPVDPEELPDYHDVIDNPMDFATVRKKL-ANGSYTTLEQFESDVFLICSNAMQYNSSDTI 279
Query: 514 YYKCASRLE 522
Y+K A ++
Sbjct: 280 YHKQARSIQ 288
>IMGA|CT962504_23.4 Bromodomain chr03_pseudomolecule_IMGAG_V2
11834495-11829554 E EGN_Mt071002 20080227
Length = 841
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 416 FRSLSGCTDNATNQKHLT--AFMRSLLKSMHDHADAWPFKEPVDGRDVPDYYDIIKDPMD 473
F S+SG N N L + +L + F EPVD ++PDY+D+I+ PMD
Sbjct: 135 FVSVSGTPANYPNGIPLPDRKILEVILDKLQKKDTYGVFAEPVDPEELPDYHDVIEHPMD 194
Query: 474 LKTMSKRVESEQYYVTFEMFVADVRRMFANARTYNSPETIYYKCASRLE 522
T+ K++ + Y T E +D+ + +NA YN+PET+Y++ A ++
Sbjct: 195 FATVRKKL-ANGAYPTLEQLESDIFLICSNAMKYNAPETVYHRQARTIQ 242
>IMGA|AC151949_24.4 Bromodomain chr08_pseudomolecule_IMGAG_V2
486399-479069 E EGN_Mt071002 20080227
Length = 271
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 452 FKEPVDGRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFANARTYNSPE 511
F EPVD +V +YY I+K PMD TM ++ E Y T + F DV +F NA +N P
Sbjct: 104 FAEPVDPNEVENYYTIVKQPMDFGTMRAKLH-EGMYKTLQQFEHDVFLIFNNAMNFNPPG 162
Query: 512 TIYYKCASRLEAHFQSKVTAGLQSGPK 538
TIY+K A R+ KV L++ P+
Sbjct: 163 TIYFKQA-RVIGELAKKVFDVLRTDPE 188
>IMGA|AC174355_27.4 Bromodomain chr08_pseudomolecule_IMGAG_V2
16978548-16969790 E EGN_Mt071002 20080227
Length = 369
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 430 KHLTAFMRSLLKSMHDHADAWPFKEPVD--GRDVPDYYDIIKDPMDLKTMSKRVESEQ-- 485
+ + +R + H AWPF EPVD G + DYY+II PMD T+ ++E++
Sbjct: 95 RQFSTILRQATFQITQHKWAWPFLEPVDVEGLGLHDYYEIIDKPMDFGTIKNKMEAKDGT 154
Query: 486 YYVTFEMFVADVRRMFANARTYNSPETIYYKCASRLEAHFQSK 528
Y ADVR +F NA YN+ + + A L F+ K
Sbjct: 155 GYKNVREIYADVRLIFKNAMKYNNEKHDVHVMAKTLMEKFEDK 197
>IMGA|AC135231_1.4 Bromodomain chr04_pseudomolecule_IMGAG_V2
22912241-22920076 E EGN_Mt071002 20080227
Length = 991
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 438 SLLKSMHDHADAWPFKEPVD--GRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVA 495
SLL+ + H AW F PVD G + DY+ II +PMDL T+ R+ ++ +Y + + F
Sbjct: 661 SLLEKLMKHQYAWVFNTPVDVDGLGLHDYFTIITNPMDLGTVKTRL-NKNWYKSPKEFAE 719
Query: 496 DVRRMFANARTYNSPETIYYKCASRLEAHFQSK 528
DVR F NA TYN + A +L F+ +
Sbjct: 720 DVRLTFHNAMTYNPKGQDVHAMAEQLSKIFEDR 752
>IMGA|AC136139_29.5 Bromodomain chr08_pseudomolecule_IMGAG_V2
446962-441968 E EGN_Mt071002 20080227
Length = 530
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 452 FKEPVDGRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRR----------MF 501
F EPVD +V +YY I+K PMD TM ++ E Y T + F +V + +F
Sbjct: 104 FAEPVDPNEVENYYTIVKQPMDFGTMRAKLH-EGMYKTLQQFEVEVYKHWSCNHDVFLIF 162
Query: 502 ANARTYNSPETIYYKCASRLEAHFQSKVTAGLQSGPK 538
NA +N P TIY+K A R+ KV L++ P+
Sbjct: 163 NNAMNFNPPGTIYFKQA-RVIGELAKKVFDVLRTDPE 198
>IMGA|CR962137_24.4 Bromodomain chr05_pseudomolecule_IMGAG_V2
23470443-23474102 H EGN_Mt071002 20080227
Length = 302
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 449 AWPFKEPVD--GRDVPDYYDIIKDPMDLKTMSKRVESE--QYYVTFEMFVADVRRMFANA 504
AWPF +PVD G + DYY II+ PMD T+ R+E++ Y ADVR +F NA
Sbjct: 75 AWPFLDPVDVEGLGLYDYYQIIEKPMDFSTIKIRMEAKDGSGYKNVREIYADVRLIFKNA 134
Query: 505 RTYNSPETIYYKCASRLEAHFQSKVT 530
YN + + A L F++ ++
Sbjct: 135 MKYNDEKNDVHVMAKTLLEKFENDLS 160
>IMGA|AC202375_13.3 Bromodomain chr04_pseudomolecule_IMGAG_V2
26598634-26596312 F EGN_Mt071002 20080227
Length = 534
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 439 LLKSMHDHADAWPFKEPVD--GRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVAD 496
+L+ + W F PVD ++ DY+DIIK PMDL T+ ++ Y E F D
Sbjct: 155 ILQKLMKTKIGWIFSSPVDPVALNLHDYFDIIKHPMDLGTVKSKLAKNAYSTPAE-FADD 213
Query: 497 VRRMFANARTYN 508
V+ F NA TYN
Sbjct: 214 VKLTFKNALTYN 225
>IMGA|AC144564_66.4 Bromodomain chr04_pseudomolecule_IMGAG_V2
26512708-26510386 F EGN_Mt071002 20080227
Length = 534
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 439 LLKSMHDHADAWPFKEPVD--GRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVAD 496
+L+ + W F PVD ++ DY+DIIK PMDL T+ ++ Y E F D
Sbjct: 155 ILQKLMKTKIGWIFSSPVDPVALNLHDYFDIIKHPMDLGTVKSKLAKNAYSTPAE-FADD 213
Query: 497 VRRMFANARTYN 508
V+ F NA TYN
Sbjct: 214 VKLTFKNALTYN 225
>IMGA|AC202375_11.3 Bromodomain chr04_pseudomolecule_IMGAG_V2
26588012-26586596 E EGN_Mt071002 20080227
Length = 390
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 448 DAWPFKEPVDGR--DVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFANAR 505
+ W F PV+ ++ DY+DIIK PMDL T+ ++ Y E F DV+ F NA
Sbjct: 165 NTWIFNTPVNATALNLHDYFDIIKHPMDLGTVKSKLAKNAYSTPAE-FADDVKLTFKNAL 223
Query: 506 TYN 508
TYN
Sbjct: 224 TYN 226
>IMGA|AC140550_58.4 Bromodomain chr02_pseudomolecule_IMGAG_V2
325861-330183 E EGN_Mt071002 20080227
Length = 591
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 449 AWPFKEPVD--GRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFANART 506
A PF PV+ +PDY+DII PMD T+ +E Y+ E DVR ++ N
Sbjct: 212 AEPFNVPVNPEALGIPDYFDIIDTPMDFGTICSNLEKNDKYMNSEDVYNDVRYIWENCYK 271
Query: 507 YNSPETIYYKCASRLEAHFQSK-VTAGLQS 535
YN+ R++ +F AGL S
Sbjct: 272 YNNKGDYIVDLMKRVKKNFMKYWAAAGLYS 301
>IMGA|AC144564_64.4 Bromodomain chr04_pseudomolecule_IMGAG_V2
26502094-26499604 E EGN_Mt071002 20080227
Length = 533
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 448 DAWPFKEPVDGR--DVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFANAR 505
+ W F PV+ ++ DY+DIIK PMDL T+ ++ Y E F DV+ F NA
Sbjct: 165 NTWIFNTPVNATALNLHDYFDIIKHPMDLGTVKSKLAKNAYSTPAE-FADDVKLTFKNAL 223
Query: 506 TYN 508
TYN
Sbjct: 224 TYN 226