Miyakogusa Predicted Gene

chr1.CM0371.310.nc

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr1.CM0371.310.nc + phase: 0 /partial
         (284 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC167711_26.5 YT521-B-like protein chr07_pseudomolecule_IMG...   283   5e-77
IMGA|AC202520_15.3 YT521-B-like protein chr06_pseudomolecule_IMG...   130   4e-31
IMGA|AC152752_5.4 YT521-B-like protein chr04_pseudomolecule_IMGA...    50   1e-06

>IMGA|AC167711_26.5 YT521-B-like protein
           chr07_pseudomolecule_IMGAG_V2 21339285-21334340 E
           EGN_Mt071002 20080227
          Length = 662

 Score =  283 bits (725), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 165/299 (55%), Positives = 191/299 (63%), Gaps = 19/299 (6%)

Query: 1   MAPVPPSAD---KAADLLQNLSLDTNPKT-TGVAEPAKKNGPAFSNGTAKGMTKPLTPNP 56
           M  V PS++   +AA LLQNLSLD+ PKT  G AEP KKNGP F+NG AKG  KP  PNP
Sbjct: 1   MPSVAPSSEPTIEAASLLQNLSLDSQPKTIVGDAEPVKKNGPVFANGAAKGTGKPFNPNP 60

Query: 57  SFVPNXXXXXXXXXXXXXXQNDWNVYSRYMNLDGGMAQGVYGDSCSYMYNQXXXXXXXXX 116
           S+VPN               + W+ YS Y+NLDGGM QGVYGD+CSYMY+Q         
Sbjct: 61  SYVPNGYPSTYYYGGYDGQGD-WSGYSNYVNLDGGMTQGVYGDNCSYMYHQGYGYTPYGA 119

Query: 117 XXXXXXSSPIIQHDXXXXXXXXXXXXXXXXXKSPASADVSFAPNKVSVPQGEIPTAVNAD 176
                 SSP++QHD                  SP SAD SFAPNK SVPQ E+ TAVNAD
Sbjct: 120 YASPNSSSPVVQHDGQMYGLQQYQYPCSYY-NSPTSADGSFAPNKTSVPQREMSTAVNAD 178

Query: 177 HIPSSNVMNKGNSVSVANGGDCANKNGLNAILTSSQHNTLNANNSYP-SGMTAYAPLSGY 235
            I +SNVMNKGNSVS+ NG DC N+NGL A + SSQH +LN  +SY  S + A APLSGY
Sbjct: 179 RI-TSNVMNKGNSVSMVNG-DCTNQNGLKAFMKSSQHTSLNTKDSYQGSSLPACAPLSGY 236

Query: 236 QGPRMSTQGTQSAVPSDVSLASDRQTKHGAKV----------NFSSQRNQRHPQPLQQF 284
           QGPR+ST G QSA+P+DVSL SDRQ+KHG KV          +FSSQRNQRH Q L QF
Sbjct: 237 QGPRLSTHGAQSAIPTDVSLVSDRQSKHGGKVGLSSQVANIKDFSSQRNQRHSQSLPQF 295


>IMGA|AC202520_15.3 YT521-B-like protein
           chr06_pseudomolecule_IMGAG_V2 5777103-5782215 E
           EGN_Mt071002 20080227
          Length = 663

 Score =  130 bits (328), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/298 (36%), Positives = 144/298 (48%), Gaps = 38/298 (12%)

Query: 1   MAPVPPSADKAADLLQNLSLDT-NPKTTGVAEPAKKNGPAFSNGTAKGMTKPLTPNPSFV 59
           M+ V   +    +L+QNLSLD+  P+T  V EPAKK G    +G A  + K   PN S+V
Sbjct: 1   MSTVVVFSPDTTNLMQNLSLDSAEPRTIAVPEPAKKAG----HGQANEVPKTFNPNASYV 56

Query: 60  PN---XXXXXXXXXXXXXXQNDWNVYSRYMNLDGGMAQGVYGDSCSYMYNQXXXXXXXXX 116
           PN                  NDWNVY  Y+N +GGMAQGVYGDS SYMY Q         
Sbjct: 57  PNGHPSISYYYGGYDGQGDWNDWNVYQNYVNANGGMAQGVYGDSGSYMYPQGYGYAPYGS 116

Query: 117 XXXXXXSSPIIQHDXXXXXXXXXXXXXXXXXKSPASADVSFAPNKVSVPQGEIPTAVNAD 176
                 S   + HD                  + A+       NK +V  G+  T V A+
Sbjct: 117 YPSPSTSP-SLPHDDKLYGLQQYQYPSYYQPSASANGTYGATANKTNVHGGKTSTPVTAE 175

Query: 177 HIPSSNVMNKGNSVSVANGGDCANKNGLNAILTSSQHNTLNANNSYPSGMTAYAPLSGYQ 236
           H+PSS VMNKG++ ++ NG               S +N ++ ++   +G  AYAP+SGY 
Sbjct: 176 HVPSS-VMNKGSTTTMTNG--------------YSSNNNVSNDSYQRAGYAAYAPVSGYA 220

Query: 237 GPRMSTQGTQSAVPSDVSLASDRQTKHGAKV----------NFSSQRNQRHPQPLQQF 284
           G    T GTQ + PSD  L SDRQ+K+G+K           +FSSQRN    QPL Q+
Sbjct: 221 G----TYGTQPSYPSDPLLFSDRQSKNGSKTGYSTPAVPRKDFSSQRNSSLSQPLPQY 274


>IMGA|AC152752_5.4 YT521-B-like protein
           chr04_pseudomolecule_IMGAG_V2 31295325-31291291 E
           EGN_Mt071002 20080227
          Length = 677

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 104/279 (37%), Gaps = 51/279 (18%)

Query: 1   MAPVPPSADKAADLLQNLSLDTNPKTTGVAEPAKK------------NG--PAFSNGTAK 46
           MA V   AD+AA+LLQ  SL++ PK+  + EP KK            NG  P++      
Sbjct: 1   MAAVANPADQAAELLQKFSLESQPKSLEIPEPNKKATGNQYDSGNALNGQIPSYERSVTP 60

Query: 47  GMTKPLTPNPSFVPNXXXXXXXXXXXXXXQNDWNVYSRYMNLDG-GMAQGVYGDS-CSYM 104
            +   + P   ++PN               ++W     Y+N DG  +  GVYGD+  S +
Sbjct: 61  VLQDFMDPAMCYLPN-GYPSYYYGGYDGTGSEW----EYLNADGVDLTSGVYGDNGSSLV 115

Query: 105 YNQXXXXXXXXXXXXXXXSSPIIQHDXXXXXXXXXXXXXXXXXKSPASADVSFAPNKVSV 164
           Y+                  P + +D                  +P S    F P   + 
Sbjct: 116 YHHGYGYAPYAPYSPAGSPVPTMGNDGQLYGPQHYQYPPFFQPLTPTSG--PFTPTSAAH 173

Query: 165 PQGEIPTAVNADHIPSSNVMNKGNSVSVANGGDCANKNGLNAILTSSQHNTLNANNSYPS 224
           PQG+  T+V AD  P         SV  ANG   A  NG+NA                  
Sbjct: 174 PQGDNSTSVAADQKPL--------SVEAANGNTNAGTNGVNA-----------------K 208

Query: 225 GMTAYAPLSGYQGPRMSTQGTQSA-VPSDVSLASDRQTK 262
           G T  +   GYQ PR    G +S  +  D  + SD Q +
Sbjct: 209 GRTPTS--GGYQDPRYGFDGARSPNLWLDTPIFSDGQPR 245