Miyakogusa Predicted Gene
- chr1.CM0295.1160.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr1.CM0295.1160.nc - phase: 0
(612 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G20330.1 | Symbols: | transducin family protein / WD-40 repe... 832 0.0
AT5G25150.1 | Symbols: TAF5 | TAF5 (TBP-ASSOCIATED FACTOR 5); nu... 71 3e-12
AT2G43770.1 | Symbols: | transducin family protein / WD-40 repe... 70 5e-12
AT4G02730.1 | Symbols: | transducin family protein / WD-40 repe... 63 7e-10
AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchles... 62 1e-09
AT5G67320.1 | Symbols: HOS15 | WD-40 repeat family protein | chr... 59 9e-09
AT1G15440.2 | Symbols: | transducin family protein / WD-40 repe... 57 3e-08
AT5G08390.1 | Symbols: | similar to transducin family protein /... 57 3e-08
AT1G15440.1 | Symbols: | transducin family protein / WD-40 repe... 57 3e-08
AT1G29260.1 | Symbols: PEX7 | PEX7 (peroxin 7) | chr1:10224909-1... 57 4e-08
AT1G61210.1 | Symbols: | WD-40 repeat family protein / katanin ... 55 1e-07
AT3G49660.1 | Symbols: | transducin family protein / WD-40 repe... 55 2e-07
AT1G27840.3 | Symbols: ATCSA-1 | ATCSA-1; nucleotide binding | c... 53 6e-07
AT1G27840.1 | Symbols: ATCSA-1 | ATCSA-1; nucleotide binding | c... 53 6e-07
AT2G19540.1 | Symbols: | transducin family protein / WD-40 repe... 53 7e-07
AT5G58230.1 | Symbols: MEE70, MSI1 | MSI1 (MULTICOPY SUPRESSOR O... 52 7e-07
AT4G15900.1 | Symbols: PRL1 | PRL1 (PLEIOTROPIC REGULATORY LOCUS... 51 2e-06
AT3G42660.1 | Symbols: | nucleotide binding | chr3:14762266-147... 51 2e-06
AT5G64630.2 | Symbols: NFB01, NFB1, MUB3, FAS2 | FAS2 (FASCIATA ... 50 4e-06
AT5G64730.1 | Symbols: | transducin family protein / WD-40 repe... 50 4e-06
AT2G41500.1 | Symbols: LIS, EMB2776 | EMB2776/LIS (LACHESIS); nu... 50 5e-06
AT5G64630.1 | Symbols: NFB01, NFB1, MUB3, FAS2 | FAS2 (FASCIATA ... 50 5e-06
AT1G78070.2 | Symbols: | WD-40 repeat family protein | chr1:293... 50 5e-06
AT2G34260.1 | Symbols: | transducin family protein / WD-40 repe... 50 6e-06
AT2G34260.2 | Symbols: | transducin family protein / WD-40 repe... 49 7e-06
AT2G16780.1 | Symbols: MSI02, NFC02, NFC2, MSI2 | MSI2 (NUCLEOSO... 49 9e-06
AT1G71840.1 | Symbols: | transducin family protein / WD-40 repe... 49 9e-06
AT1G49040.1 | Symbols: SCD1 | SCD1 (STOMATAL CYTOKINESIS-DEFECTI... 49 9e-06
AT2G47410.1 | Symbols: | nucleotide binding | chr2:19456203-194... 49 1e-05
AT1G19750.1 | Symbols: | transducin family protein / WD-40 repe... 49 1e-05
AT1G73720.1 | Symbols: | transducin family protein / WD-40 repe... 49 1e-05
AT2G26060.1 | Symbols: EMB1345 | EMB1345 (EMBRYO DEFECTIVE 1345)... 49 1e-05
AT4G04940.1 | Symbols: | transducin family protein / WD-40 repe... 49 1e-05
AT2G46290.1 | Symbols: | eukaryotic translation initiation fact... 49 1e-05
AT5G23430.1 | Symbols: | transducin family protein / WD-40 repe... 48 2e-05
AT5G23430.2 | Symbols: | transducin family protein / WD-40 repe... 48 2e-05
AT5G13480.1 | Symbols: FY | FY | chr5:4326641-4331560 REVERSE 48 2e-05
AT3G44530.1 | Symbols: HIRA | HIRA (ARABIDOPSIS HOMOLOG OF HISTO... 48 2e-05
AT3G18130.1 | Symbols: | guanine nucleotide-binding family prot... 48 2e-05
AT4G32990.1 | Symbols: | transducin family protein / WD-40 repe... 47 3e-05
AT3G15880.2 | Symbols: WSIP2, TPR4 | TPR4/WSIP2 (TOPLESS-RELATED... 47 4e-05
AT3G15880.1 | Symbols: WSIP2, TPR4 | TPR4/WSIP2 (TOPLESS-RELATED... 47 4e-05
AT3G49400.1 | Symbols: | transducin family protein / WD-40 repe... 46 6e-05
AT5G54520.1 | Symbols: | WD-40 repeat family protein | chr5:221... 46 6e-05
AT4G00090.1 | Symbols: | transducin family protein / WD-40 repe... 46 6e-05
AT3G21540.1 | Symbols: | transducin family protein / WD-40 repe... 46 7e-05
AT3G16650.1 | Symbols: | PP1/PP2A phosphatases pleiotropic regu... 46 7e-05
AT1G48630.1 | Symbols: | guanine nucleotide-binding family prot... 46 8e-05
AT3G49180.1 | Symbols: | transducin family protein / WD-40 repe... 46 8e-05
AT5G16750.1 | Symbols: TOZ | TOZ (TORMOZEMBRYO DEFECTIVE); nucle... 45 1e-04
AT2G33340.2 | Symbols: | transducin family protein / WD-40 repe... 45 1e-04
AT2G33340.3 | Symbols: | transducin family protein / WD-40 repe... 45 1e-04
AT5G50650.1 | Symbols: | WD-40 repeat family protein / St12p pr... 45 1e-04
AT5G50550.1 | Symbols: | WD-40 repeat family protein / St12p pr... 45 1e-04
AT2G33340.1 | Symbols: | transducin family protein / WD-40 repe... 45 2e-04
AT2G26060.2 | Symbols: EMB1345 | EMB1345 (EMBRYO DEFECTIVE 1345)... 45 2e-04
AT2G46280.2 | Symbols: TIF3I1, TRIP-1 | TRIP-1 (TGF-BETA RECEPTO... 45 2e-04
AT2G46280.1 | Symbols: TIF3I1, TRIP-1 | TRIP-1 (TGF-BETA RECEPTO... 45 2e-04
AT4G34460.4 | Symbols: ELK4, AGB1 | AGB1 (GTP BINDING PROTEIN BE... 45 2e-04
AT4G34460.3 | Symbols: ELK4, AGB1 | AGB1 (GTP BINDING PROTEIN BE... 45 2e-04
AT1G18080.1 | Symbols: ATARCA | ATARCA (Arabidopsis thaliana Hom... 45 2e-04
AT5G56190.1 | Symbols: | WD-40 repeat family protein | chr5:227... 45 2e-04
AT4G34460.1 | Symbols: ELK4, AGB1 | AGB1 (GTP BINDING PROTEIN BE... 45 2e-04
AT1G11160.1 | Symbols: | nucleotide binding | chr1:3733406-3739... 45 2e-04
AT5G56190.2 | Symbols: | WD-40 repeat family protein | chr5:227... 45 2e-04
AT2G46280.3 | Symbols: TIF3I1, TRIP-1 | TRIP-1 (TGF-BETA RECEPTO... 44 2e-04
AT2G21390.1 | Symbols: | coatomer protein complex, subunit alph... 44 2e-04
AT1G27840.2 | Symbols: ATCSA-1 | ATCSA-1; nucleotide binding | c... 44 2e-04
AT1G15750.4 | Symbols: WSIP1, TPL | TPL/WSIP1 (WUS-INTERACTING P... 44 2e-04
AT1G15750.3 | Symbols: WSIP1, TPL | TPL/WSIP1 (WUS-INTERACTING P... 44 2e-04
AT1G15750.2 | Symbols: WSIP1, TPL | TPL/WSIP1 (WUS-INTERACTING P... 44 2e-04
AT1G15750.1 | Symbols: WSIP1, TPL | TPL/WSIP1 (WUS-INTERACTING P... 44 2e-04
AT3G13340.1 | Symbols: | WD-40 repeat family protein | chr3:433... 44 3e-04
AT1G15470.1 | Symbols: | transducin family protein / WD-40 repe... 44 3e-04
AT3G18060.1 | Symbols: | transducin family protein / WD-40 repe... 44 3e-04
AT1G04510.1 | Symbols: | transducin family protein / WD-40 repe... 44 4e-04
AT1G04510.2 | Symbols: | transducin family protein / WD-40 repe... 44 4e-04
AT2G26490.1 | Symbols: | transducin family protein / WD-40 repe... 43 5e-04
AT3G63460.2 | Symbols: | WD-40 repeat family protein | chr3:234... 43 5e-04
AT3G63460.1 | Symbols: | WD-40 repeat family protein | chr3:234... 43 5e-04
AT5G56130.1 | Symbols: | transducin family protein / WD-40 repe... 43 6e-04
AT4G35050.1 | Symbols: NFC3, MSI3 | MSI3 (NUCLEOSOME/CHROMATIN A... 43 6e-04
AT1G76260.1 | Symbols: | transducin family protein / WD-40 repe... 43 6e-04
AT2G01330.1 | Symbols: | transducin family protein / WD-40 repe... 43 7e-04
AT5G49430.1 | Symbols: | transducin family protein / WD-40 repe... 43 7e-04
AT1G62020.1 | Symbols: | coatomer protein complex, subunit alph... 43 7e-04
AT2G25420.1 | Symbols: | similar to TPR4/WSIP2 (TOPLESS-RELATED... 42 8e-04
>AT2G20330.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:8779969-8782599 REVERSE
Length = 648
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/482 (79%), Positives = 440/482 (91%)
Query: 130 RFRIPLSNEIVLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEP 189
R++IPLSNEI LKGHTK+VS+LAVD +G+RVLSGSYDYTVRMYDFQGMNSRLQSFRQ+EP
Sbjct: 162 RYQIPLSNEIQLKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYDFQGMNSRLQSFRQIEP 221
Query: 190 FEGHQVRNLSWSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGL 249
EGHQVR++SWSP++ +FLC+TGSAQAKI+DRDGLTLGEFMKGDMYIRDLKNTKGHI GL
Sbjct: 222 SEGHQVRSVSWSPTSGQFLCVTGSAQAKIFDRDGLTLGEFMKGDMYIRDLKNTKGHICGL 281
Query: 250 TWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKC 309
T GEWHP+ KET+LTSSEDGSLRIWDVN+F SQ QVIKPKL+RPGRVPV TC W+ DGK
Sbjct: 282 TCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKR 341
Query: 310 IAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWD 369
IAGG+GDGSIQIW++KPGWGSRPDI++ K+H DDIT + FSSD RILLSRSFDGSLKVWD
Sbjct: 342 IAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWD 401
Query: 370 LRKTKDALKVFEDLPNNYAQTNIAFSPDEQLFFTGTSVERESTTGGLLCFFDRLNLDLVS 429
LR+ K+ALKVFE LPN Y QTN+AFSPDEQ+ TGTSVE++STTGGLLCF+DR L++V
Sbjct: 402 LRQMKEALKVFEGLPNYYPQTNVAFSPDEQIILTGTSVEKDSTTGGLLCFYDRTKLEIVQ 461
Query: 430 RVGIAPTSSVIRCSWHPKLNQIFATVGDKSQGGTHILYDPTISEKGALVCVARAPRKKSV 489
+VGI+PTSSV++C+WHP+LNQIFAT GDKSQGGTHILYDP+ SE+GA VCVARAPRKKSV
Sbjct: 462 KVGISPTSSVVQCAWHPRLNQIFATSGDKSQGGTHILYDPSQSERGACVCVARAPRKKSV 521
Query: 490 DDFEAKPAIHNPHALPLFRDQPSRKRQREKILKDPLKSHKPELPMNGPGFGGRVGTSQGS 549
DD++ +P IHNPHALPLFRD PSRKR+REK LKDP+KSHKPE+PM GPG GGRVGT+
Sbjct: 522 DDYQPEPVIHNPHALPLFRDAPSRKREREKALKDPMKSHKPEIPMTGPGHGGRVGTTGSG 581
Query: 550 LLTQYLLKQGGMIKETWMEEDPREAILKYADVAKKDPKYIAPAYAETQPEPVYAKSDSED 609
LLTQYLLKQGGMIKETWMEEDPREAILKYA+VA KDPK+IAPAY++TQP+ ++AKSD E+
Sbjct: 582 LLTQYLLKQGGMIKETWMEEDPREAILKYAEVAVKDPKFIAPAYSQTQPKTIFAKSDDEE 641
Query: 610 EE 611
EE
Sbjct: 642 EE 643
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 9 DGARAQFPLSFGKQSKSQTPLEAIHNATRRSN 40
+G RA FP+SFGK SK EAIH+ATRR++
Sbjct: 6 EGLRAHFPVSFGKTSKVSASTEAIHSATRRTD 37
>AT5G25150.1 | Symbols: TAF5 | TAF5 (TBP-ASSOCIATED FACTOR 5);
nucleotide binding | chr5:8677120-8682061 FORWARD
Length = 669
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 108/244 (44%), Gaps = 32/244 (13%)
Query: 140 VLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQ--VRN 197
+L GH+ V + G VLS S D T+R++ + +N+ L ++ GH V +
Sbjct: 413 LLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTK-LNANLVCYK------GHNYPVWD 465
Query: 198 LSWSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPK 257
+SP F + A+I+ D I+ L+ GH++ + +WHP
Sbjct: 466 AQFSPFGHYFASCSHDRTARIWSMD------------RIQPLRIMAGHLSDVDCVQWHPN 513
Query: 258 AKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDG 317
I T S D ++R+WDV + + I R V + + DG+ +A G DG
Sbjct: 514 CN-YIATGSSDKTVRLWDVQTGECVRIFIGH------RSMVLSLAMSPDGRYMASGDEDG 566
Query: 318 SIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKDAL 377
+I +W++ P + H + L++S + +L S S D ++K+WD+ +
Sbjct: 567 TIMMWDLSTARCITPLM----GHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLT 622
Query: 378 KVFE 381
K E
Sbjct: 623 KAEE 626
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 105/267 (39%), Gaps = 31/267 (11%)
Query: 152 AVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSWSPSADRFLCIT 211
++ H GS V G D +++++D + Q E Q S P+ R +
Sbjct: 359 SISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQ----SIGPNGRRSYTLL 414
Query: 212 GSAQAKIYDRDGLTLGEFM---KGDMYIR--------DLKNTKGHITGLTWGEWHPKAKE 260
+Y G+F+ D IR +L KGH + W
Sbjct: 415 LGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPV-WDAQFSPFGH 473
Query: 261 TILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVP-VNTCTWNHDGKCIAGGIGDGSI 319
+ S D + RIW ++ I+P G + V+ W+ + IA G D ++
Sbjct: 474 YFASCSHDRTARIWSMDR-------IQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTV 526
Query: 320 QIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKDALKV 379
++W+++ G R I H + L S D R + S DG++ +WDL + +
Sbjct: 527 RLWDVQTGECVR----IFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPL 582
Query: 380 FEDLPNNYAQTNIAFSPDEQLFFTGTS 406
+ +N ++++S + L +G++
Sbjct: 583 ---MGHNSCVWSLSYSGEGSLLASGSA 606
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 72/182 (39%), Gaps = 31/182 (17%)
Query: 298 VNTCTWNHDGKCIAGGIGDGSIQIWNI-KPGWGSRPDIHIEKSHEDDITG---------- 346
+N + +HDG +AGG D SI++W++ K G + E D G
Sbjct: 355 LNCSSISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPNGRRSYTLL 414
Query: 347 ---------LTFSSDERILLSRSFDGSLKVWDLRKTKDALKVFEDLPNNYAQTNIAFSPD 397
TFS +LS S D ++++W + + L ++ +NY + FSP
Sbjct: 415 LGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNAN-LVCYKG--HNYPVWDAQFSPF 471
Query: 398 EQLFFTGTSVERESTTGGLLCFFDRLNLDLVSRVGIAPTSSVIRCSWHPKLNQIFATVGD 457
+F S +R + + DR+ R+ S V WHP N I D
Sbjct: 472 GH-YFASCSHDRTARIWSM----DRIQ---PLRIMAGHLSDVDCVQWHPNCNYIATGSSD 523
Query: 458 KS 459
K+
Sbjct: 524 KT 525
>AT2G43770.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:18141349-18142380 REVERSE
Length = 343
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 142/335 (42%), Gaps = 58/335 (17%)
Query: 139 IVLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQ--VR 196
++L GH V + + +G+ + SGS+D + ++ G + +GH+ +
Sbjct: 47 MLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHG------DCKNFMVLKGHKNAIL 100
Query: 197 NLSWSPSADRFLCITGSAQAKIYDRD-GLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWH 255
+L W+ + + + + +D + G + + + ++ T+
Sbjct: 101 DLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTR------------ 148
Query: 256 PKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIG 315
+ I++ S+DG+ ++WD+ Q+ I+ + P + + +++ I G
Sbjct: 149 -RGPPLIISGSDDGTAKLWDMR----QRGAIQ---TFPDKYQITAVSFSDAADKIFTGGV 200
Query: 316 DGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLR---K 372
D +++W+++ G + + H+D ITG++ S D LL+ D L VWD+R
Sbjct: 201 DNDVKVWDLRKGEATM----TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAP 256
Query: 373 TKDALKVFEDLPNNYAQT--NIAFSPDEQLFFTGTSVERESTTGGLLCFFDRLN--LDLV 428
+K+FE +N+ + ++SPD GT V S+ DR+ D
Sbjct: 257 QNRCVKIFEGHQHNFEKNLLKCSWSPD------GTKVTAGSS--------DRMVHIWDTT 302
Query: 429 SRVGI----APTSSVIRCSWHPKLNQIFATVGDKS 459
SR I T SV C +HP I + DK+
Sbjct: 303 SRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKN 337
>AT4G02730.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:1207759-1209066 FORWARD
Length = 333
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 139/337 (41%), Gaps = 55/337 (16%)
Query: 141 LKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQ--VRNL 198
L+GHT +S + + G+ + S S D T+ ++ ++ + +EGH + +L
Sbjct: 39 LEGHTAAISCVKFSNDGNLLASASVDKTMILWS-------ATNYSLIHRYEGHSSGISDL 91
Query: 199 SWSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKA 258
+WS + + +I+D LK +GH + ++P +
Sbjct: 92 AWSSDSHYTCSASDDCTLRIWDARSP-----------YECLKVLRGHTNFVFCVNFNPPS 140
Query: 259 KETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGS 318
I++ S D ++RIW+V K + + + +P+++ +N DG I DGS
Sbjct: 141 -NLIVSGSFDETIRIWEVKTGKCVRMI------KAHSMPISSVHFNRDGSLIVSASHDGS 193
Query: 319 IQIWNIKPGWGSRPDIHIEKSHEDD----ITGLTFSSDERILLSRSFDGSLKVWDLRKTK 374
+IW+ K G + I DD ++ FS + + +L + D +LK+ + T
Sbjct: 194 CKIWDAKEGTCLKTLI-------DDKSPAVSFAKFSPNGKFILVATLDSTLKLSNY-ATG 245
Query: 375 DALKVFEDLPNNYAQTNIAFSPDEQLFFTGTSVERESTTGGLLCFFDRLNLDLVSRVGIA 434
LKV+ N AFS + S + + +D +++ R+
Sbjct: 246 KFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDN------CVYLWDLQARNILQRLE-G 298
Query: 435 PTSSVIRCSWHPKLNQIFATVGDKSQGGTHILYDPTI 471
T +VI S HP N+I S G H+ D TI
Sbjct: 299 HTDAVISVSCHPVQNEI-------SSSGNHL--DKTI 326
>AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchless
protein, putative | chr5:21418649-21421429 FORWARD
Length = 473
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 122/287 (42%), Gaps = 35/287 (12%)
Query: 131 FRIPLSNEI--VLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLE 188
FRI N + GH + V ++ G ++ SGS D TVR++D L + L
Sbjct: 93 FRIRPVNRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWD-------LYTETPLF 145
Query: 189 PFEGHQ--VRNLSWSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHI 246
+GH+ V ++WSP + + S + ++ KG++ L K I
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPK--------KGELEGSPLTGHKKWI 197
Query: 247 TGLTWGEWHPKAK-ETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCT-WN 304
TG++W H + +TSS+DG RIWD+ KS + G TC W
Sbjct: 198 TGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKS-------IICLSGHTLAVTCVKWG 250
Query: 305 HDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGS 364
DG I G D +I++W G I K H I L S+ E +L + +FD +
Sbjct: 251 GDG-IIYTGSQDCTIKMWETTQG----KLIRELKGHGHWINSLALST-EYVLRTGAFDHT 304
Query: 365 LKVWDLRKTKD-ALKVFEDLPNNYAQTNIAFSPDEQLFFTGTSVERE 410
+ + + K AL+ + + + ++ S D +F SV ++
Sbjct: 305 GRQYPPNEEKQKALERYNKTKGDSPERLVSGSDDFTMFLWEPSVSKQ 351
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 128/267 (47%), Gaps = 40/267 (14%)
Query: 139 IVLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNL 198
I L GHT V+ + G + +GS D T++M++ ++ + R+L+ GH + +L
Sbjct: 235 ICLSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWE----TTQGKLIRELKG-HGHWINSL 288
Query: 199 SWSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKA 258
+ S ++ TG+ +D G + + TKG +
Sbjct: 289 ALS---TEYVLRTGA-----FDHTGRQYPPNEEKQKALERYNKTKG------------DS 328
Query: 259 KETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGS 318
E +++ S+D ++ +W+ + K K+ +L+ ++ VN ++ DGK IA D S
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQPKK----RLTGHQQL-VNHVYFSPDGKWIASASFDKS 383
Query: 319 IQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKDALK 378
+++WN G + + + H + +++S+D R+LLS S D +LK+W++R K
Sbjct: 384 VRLWNGITG----QFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTK----K 435
Query: 379 VFEDLPNNYAQT-NIAFSPDEQLFFTG 404
+ +DLP + + + +SPD + +G
Sbjct: 436 LKQDLPGHADEVFAVDWSPDGEKVVSG 462
>AT5G67320.1 | Symbols: HOS15 | WD-40 repeat family protein |
chr5:26874494-26878200 FORWARD
Length = 613
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 122/329 (37%), Gaps = 77/329 (23%)
Query: 133 IPLSNEIVLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDF-QGMNSRLQSFRQLEPF- 190
IP S+ +L+GHT V A A S S + SGS D T R++ +G + + R +
Sbjct: 253 IPNSDVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALI 312
Query: 191 ----------EGHQVRNLSWSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLK 240
+ V L W+ + QA+I+ +G I L
Sbjct: 313 LKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNG----------ELISTLS 362
Query: 241 NTKGHITGLTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQ---------------- 284
KG I L W K + +LT S D + +WDV + ++Q
Sbjct: 363 KHKGPIFSLKWN----KKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNN 418
Query: 285 -------------VIKPKLSRPGRV------PVNTCTWNHDGKCIAGGIGDGSIQIWNIK 325
+ K +RP + VN W+ G +A D + +IWNIK
Sbjct: 419 VSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIK 478
Query: 326 PGWGSRPDIHIEKSHEDDITGLTFS---------SDERILLSRSFDGSLKVWDLRKTKDA 376
+H + H +I + +S + + L S SFD ++K+WD K
Sbjct: 479 QS----TFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKML 534
Query: 377 LKVFEDLPNNYAQTNIAFSPDEQLFFTGT 405
Y+ +AFSP+ + +G+
Sbjct: 535 CSFNGHREPVYS---LAFSPNGEYIASGS 560
>AT1G15440.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:5306154-5309455 REVERSE
Length = 860
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 191 EGH--QVRNLSWSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITG 248
+GH V +++SP D L TG+ D + + + M G +I ++T +T
Sbjct: 346 QGHYFDVNCVTYSP--DSQLLATGA------DDNKVKVWNVMSGTCFITFTEHTNA-VTA 396
Query: 249 LTWGEWHPKA-KETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDG 307
L H A ++L++S DG++R WD +K+ K P P + T + D
Sbjct: 397 L-----HFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPT---PRQFVSLTADPSGDV 448
Query: 308 KCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKV 367
C AG + I +W+ K G I HE + GL FS ++L S S+D ++++
Sbjct: 449 VC-AGTLDSFEIFVWSKKTGQIK----DILSGHEAPVHGLMFSPLTQLLASSSWDYTVRL 503
Query: 368 WDLRKTKDALKVFEDLPNNYAQTNIAFSPD 397
WD+ +K ++ F +N+ +AF PD
Sbjct: 504 WDVFASKGTVETFR---HNHDVLTVAFRPD 530
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 269 GSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIKPGW 328
G L +WD ++++ ++K + VN T++ D + +A G D +++WN+ G
Sbjct: 329 GQLLVWD---WRTETYILK---QQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSG- 381
Query: 329 GSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKD 375
H + +T L F +D LLS S DG+++ WD ++ K+
Sbjct: 382 ---TCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKN 425
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 80/190 (42%), Gaps = 24/190 (12%)
Query: 139 IVLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNL 198
I HT V+AL +LS S D TVR +DF+ R ++++ Q +L
Sbjct: 385 ITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFK----RYKNYKTYTTPTPRQFVSL 440
Query: 199 SWSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRD-LKNTKGHITGLTWGEWHPK 257
+ PS D + G+ D + + K I+D L + + GL +
Sbjct: 441 TADPSGD--VVCAGTL-------DSFEIFVWSKKTGQIKDILSGHEAPVHGLMFS----P 487
Query: 258 AKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDG 317
+ + +SS D ++R+WDV F S+ V + + V T + DGK +A DG
Sbjct: 488 LTQLLASSSWDYTVRLWDV--FASKGTVETFRHNH----DVLTVAFRPDGKQLASSTLDG 541
Query: 318 SIQIWNIKPG 327
I W+ G
Sbjct: 542 QINFWDTIEG 551
>AT5G08390.1 | Symbols: | similar to transducin family protein /
WD-40 repeat family protein [Arabidopsis thaliana]
(TAIR:AT5G23430.2); similar to transducin family protein
/ WD-40 repeat family protein [Arabidopsis thaliana]
(TAIR:AT5G23430.1); similar to H0801D08.1 [Oryza sativa
(indica cultivar-group)] (GB:CAJ86243.1); similar to
H0402C08.11 [Oryza sativa (indica cultivar-group)]
(GB:CAJ86235.1); similar to unnamed protein product
[Vitis vinifera] (GB:CAO65990.1); contains InterPro
domain WD40 repeat-like (InterPro:IPR011046); contains
InterPro domain WD40/YVTN repeat-like
(InterPro:IPR015943); contains InterPro domain WD40
repeat (InterPro:IPR001680) | chr5:2701449-2706911
FORWARD
Length = 839
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 40/267 (14%)
Query: 143 GHTKVVSALAVDHSGSRVL-SGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSWS 201
H+ V+ L + SRVL +G D+ V ++ N+ L + GH S +
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLY-------GHSSGIDSVT 66
Query: 202 PSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKET 261
A L G+A I D ++ +R L GH + +HP E
Sbjct: 67 FDASEGLVAAGAASGTIKLWD-------LEEAKVVRTLT---GHRSNCVSVNFHPFG-EF 115
Query: 262 ILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQI 321
+ S D +L+IWD+ + + + K G VN + DG+ I G D +++
Sbjct: 116 FASGSLDTNLKIWDI---RKKGCIHTYKGHTRG---VNVLRFTPDGRWIVSGGEDNVVKV 169
Query: 322 WNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKDALKVFE 381
W++ G +H KSHE I L F E +L + S D ++K WD L+ FE
Sbjct: 170 WDLTAG----KLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWD-------LETFE 218
Query: 382 DLPNNYAQTN----IAFSPDEQLFFTG 404
+ + +T + F+PD + G
Sbjct: 219 LIGSGGTETTGVRCLTFNPDGKSVLCG 245
>AT1G15440.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:5306154-5309455 REVERSE
Length = 900
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 22/194 (11%)
Query: 209 CITGSAQAKIY----DRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKA-KETIL 263
C+T S +++ D + + + M G +I ++T +T L H A ++L
Sbjct: 394 CVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNA-VTAL-----HFMADNHSLL 447
Query: 264 TSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQIWN 323
++S DG++R WD +K+ K P P + T + D C AG + I +W+
Sbjct: 448 SASLDGTVRAWDFKRYKNYKTYTTPT---PRQFVSLTADPSGDVVC-AGTLDSFEIFVWS 503
Query: 324 IKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKDALKVFEDL 383
K G I HE + GL FS ++L S S+D ++++WD+ +K ++ F
Sbjct: 504 KKTGQIK----DILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFR-- 557
Query: 384 PNNYAQTNIAFSPD 397
+N+ +AF PD
Sbjct: 558 -HNHDVLTVAFRPD 570
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 249 LTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGK 308
LT ++ + ++ G L +WD ++++ ++K + VN T++ D +
Sbjct: 349 LTTAVFNERGNWLTFGCAKLGQLLVWD---WRTETYILK---QQGHYFDVNCVTYSPDSQ 402
Query: 309 CIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVW 368
+A G D +++WN+ G H + +T L F +D LLS S DG+++ W
Sbjct: 403 LLATGADDNKVKVWNVMSG----TCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAW 458
Query: 369 DLRKTKD 375
D ++ K+
Sbjct: 459 DFKRYKN 465
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 80/190 (42%), Gaps = 24/190 (12%)
Query: 139 IVLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNL 198
I HT V+AL +LS S D TVR +DF+ R ++++ Q +L
Sbjct: 425 ITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFK----RYKNYKTYTTPTPRQFVSL 480
Query: 199 SWSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRD-LKNTKGHITGLTWGEWHPK 257
+ PS D + G+ D + + K I+D L + + GL +
Sbjct: 481 TADPSGD--VVCAGTL-------DSFEIFVWSKKTGQIKDILSGHEAPVHGLMFS----P 527
Query: 258 AKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDG 317
+ + +SS D ++R+WDV F S+ V + + V T + DGK +A DG
Sbjct: 528 LTQLLASSSWDYTVRLWDV--FASKGTVETFRHNH----DVLTVAFRPDGKQLASSTLDG 581
Query: 318 SIQIWNIKPG 327
I W+ G
Sbjct: 582 QINFWDTIEG 591
>AT1G29260.1 | Symbols: PEX7 | PEX7 (peroxin 7) |
chr1:10224909-10225862 FORWARD
Length = 317
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 100/246 (40%), Gaps = 43/246 (17%)
Query: 195 VRNLSWSPSADRFL-CITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGE 253
V ++ WS S D L G KIYD IR + + + +
Sbjct: 63 VYDVCWSESHDSVLIAAIGDGSVKIYDT------ALPPPSNPIRSFQEHAREVQSV---D 113
Query: 254 WHPKAKETILTSSEDGSLRIW------DVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDG 307
++P +++ LTSS D ++++W V FK + + P G
Sbjct: 114 YNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKH-----------G 162
Query: 308 KCIAGGIGDGSIQIWNIK-PGWGSRPDIHIEKSHEDDITGLTFSS-DERILLSRSFDGSL 365
A GD +++IW+++ PG I +H+ +I ++ D+ IL + S D ++
Sbjct: 163 DVFASASGDCTLRIWDVREPG-----STMIIPAHDFEILSCDWNKYDDCILATSSVDKTV 217
Query: 366 KVWDLRKTKDALKVFEDLPNNYAQTNIAFSPDEQLFFTGTSVERESTTGGLLCFFDRLNL 425
KVWD+R + L V + YA + FSP + S + +C +D +
Sbjct: 218 KVWDVRSYRVPLAVLNG--HGYAVRKVKFSPHRRSLIASCSYDMS------VCLWDYMVE 269
Query: 426 D-LVSR 430
D LV R
Sbjct: 270 DALVGR 275
>AT1G61210.1 | Symbols: | WD-40 repeat family protein / katanin p80
subunit, putative | chr1:22568450-22575220 FORWARD
Length = 1180
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 40/267 (14%)
Query: 143 GHTKVVSALAVDHSGSRV-LSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSWS 201
H+ V+ L++ SR+ ++G DY V ++ G + L S GH S +
Sbjct: 13 AHSANVNCLSIGKKTSRLFITGGDDYKVNLWAI-GKPTSLMSLC------GHTSAVDSVA 65
Query: 202 PSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKET 261
+ L + G++ I L + + M ++ GH + + E+HP E
Sbjct: 66 FDSAEVLVLAGASSGVIK------LWDVEEAKM----VRAFTGHRSNCSAVEFHPFG-EF 114
Query: 262 ILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQI 321
+ + S D +L+IWD+ K Q K SR ++T + DG+ + G D +++
Sbjct: 115 LASGSSDANLKIWDIRK-KGCIQTYKGH-SRG----ISTIRFTPDGRWVVSGGLDNVVKV 168
Query: 322 WNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKDALKVFE 381
W++ G +H K HE I L F E +L + S D ++K WD L+ FE
Sbjct: 169 WDLTAGKL----LHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWD-------LETFE 217
Query: 382 DL----PNNYAQTNIAFSPDEQLFFTG 404
+ P +I F PD + F G
Sbjct: 218 LIGSTRPEATGVRSIKFHPDGRTLFCG 244
>AT3G49660.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:18424675-18426208 FORWARD
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 244 GHITGLTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCT- 302
GH G++ + A+ I+++S+D +L++WDV K +I G C
Sbjct: 69 GHENGISDVAFSSDAR-FIVSASDDKTLKLWDVETGSLIKTLI-------GHTNYAFCVN 120
Query: 303 WNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFD 362
+N I G D +++IW++ G + + +H D +T + F+ D +++S S+D
Sbjct: 121 FNPQSNMIVSGSFDETVRIWDVTTG----KCLKVLPAHSDPVTAVDFNRDGSLIVSSSYD 176
Query: 363 GSLKVWDLRKTKDALKVFEDLPNNYAQTNIAFSPDEQLFFTGT 405
G ++WD T +K D N + + FSP+ + GT
Sbjct: 177 GLCRIWD-SGTGHCVKTLID-DENPPVSFVRFSPNGKFILVGT 217
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 121/303 (39%), Gaps = 42/303 (13%)
Query: 134 PLSNEIVLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGH 193
P + L H + VS++ G + S S D T+R Y +N + ++ F GH
Sbjct: 13 PYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIA--EPVQEFTGH 70
Query: 194 Q--VRNLSWSPSADRFLCITGSAQAKIYDRDGLTLGEFMKG------------------- 232
+ + ++++S A + + K++D + +L + + G
Sbjct: 71 ENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVS 130
Query: 233 ---DMYIRDLKNTKGHITGLTWGEWHP-------KAKETILTSSEDGSLRIWDVNDFKSQ 282
D +R T G + P + I++SS DG RIWD
Sbjct: 131 GSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCV 190
Query: 283 KQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHED 342
K +I + P PV+ ++ +GK I G D ++++WNI + +
Sbjct: 191 KTLIDDE--NP---PVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYC 245
Query: 343 DITGLTFSSDERILLSRSFDGSLKVWDLRKTKDALKVFEDLPNNYAQTNIAFSPDEQLFF 402
+ + ++ +RI +S S D + +W+L +K L+ E + N+A P E L
Sbjct: 246 ISSAFSVTNGKRI-VSGSEDNCVHMWEL-NSKKLLQKLEG--HTETVMNVACHPTENLIA 301
Query: 403 TGT 405
+G+
Sbjct: 302 SGS 304
>AT1G27840.3 | Symbols: ATCSA-1 | ATCSA-1; nucleotide binding |
chr1:9693319-9696244 REVERSE
Length = 451
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 21/167 (12%)
Query: 234 MYIRDLKNTKGHITGLTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRP 293
++ D ++ GH ++ W+P +T S D L++WD N + + V+ K+ P
Sbjct: 91 IFTVDKQHENGHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTN---TAQAVVDFKM--P 145
Query: 294 GRV---PVNTCTWNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFS 350
G+V +++ +H IA G D +++ +I G S H H D + + +S
Sbjct: 146 GKVYRTAMSSMAMSH--TLIAAGTEDVQVRLCDIASGAFS----HTLSGHRDGVMSVEWS 199
Query: 351 -SDERILLSRSFDGSLKVWDLRKTKDALKVFEDLPNNYAQTNIAFSP 396
S E +L + DG+++ WD+R+ +V + +QT + F P
Sbjct: 200 TSSEWVLYTGGCDGAIRFWDIRRA-GCFRVLDQ-----SQTQLGFRP 240
>AT1G27840.1 | Symbols: ATCSA-1 | ATCSA-1; nucleotide binding |
chr1:9693319-9696244 REVERSE
Length = 450
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 21/167 (12%)
Query: 234 MYIRDLKNTKGHITGLTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRP 293
++ D ++ GH ++ W+P +T S D L++WD N + + V+ K+ P
Sbjct: 91 IFTVDKQHENGHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTN---TAQAVVDFKM--P 145
Query: 294 GRV---PVNTCTWNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFS 350
G+V +++ +H IA G D +++ +I G S H H D + + +S
Sbjct: 146 GKVYRTAMSSMAMSH--TLIAAGTEDVQVRLCDIASGAFS----HTLSGHRDGVMSVEWS 199
Query: 351 -SDERILLSRSFDGSLKVWDLRKTKDALKVFEDLPNNYAQTNIAFSP 396
S E +L + DG+++ WD+R+ +V + +QT + F P
Sbjct: 200 TSSEWVLYTGGCDGAIRFWDIRRA-GCFRVLDQ-----SQTQLGFRP 240
>AT2G19540.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:8468886-8471429 FORWARD
Length = 469
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 34/217 (15%)
Query: 187 LEPFEGHQVRN--LSWSPS-ADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTK 243
L F GH+ + WSP+ A R L +G ++ I+ L E G + D
Sbjct: 216 LVNFSGHKDEGYAIDWSPATAGRLL--SGDCKSMIH------LWEPASGSWAV-DPIPFA 266
Query: 244 GHITGLTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLS-RPGRVPVNTCT 302
GH + +W P + + S DGS+ +WD+ KS P LS + VN +
Sbjct: 267 GHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKS------PALSFKAHNADVNVIS 320
Query: 303 WNHDGKC-IAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLS-RS 360
WN C +A G DG+ I +++ G + + H+ IT + +S+ E L+ S
Sbjct: 321 WNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTS 380
Query: 361 FDGSLKVWDLR-------------KTKDALKVFEDLP 384
D L +WDL +TK+ + +DLP
Sbjct: 381 GDNQLTIWDLSLEKDEEEEAEFNAQTKELVNTPQDLP 417
>AT5G58230.1 | Symbols: MEE70, MSI1 | MSI1 (MULTICOPY SUPRESSOR OF
IRA1) | chr5:23573338-23575220 FORWARD
Length = 424
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 95/199 (47%), Gaps = 24/199 (12%)
Query: 238 DLKNTKGHIT---GLTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPG 294
DLK +GH + GL+W ++ + +L+ S+D + +WD+N K + ++ +
Sbjct: 171 DLK-LRGHSSEGYGLSWSKF---KQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAH 226
Query: 295 RVPVNTCTWNHDGKCIAGGIGDGS-IQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSS-D 352
V W+ + + G +GD + IW+++ S+P + +H ++ L F+ +
Sbjct: 227 EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKP-VQSVVAHSMEVNCLAFNPFN 285
Query: 353 ERILLSRSFDGSLKVWDLRKTKDALKVFEDLPNNYAQTNIAFSPDEQLFFTGTSVEREST 412
E ++ + S D ++K++DLRK AL F+ S E++F G + + E+
Sbjct: 286 EWVVATGSTDKTVKLFDLRKLSTALHTFD-------------SHKEEVFQVGWNPKNETI 332
Query: 413 TGGLLCFFDRLNLDLVSRV 431
C RL + +SR+
Sbjct: 333 LAS-CCLGRRLMVWDLSRI 350
>AT4G15900.1 | Symbols: PRL1 | PRL1 (PLEIOTROPIC REGULATORY LOCUS
1); nucleotide binding | chr4:9023790-9027458 FORWARD
Length = 486
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 95/236 (40%), Gaps = 28/236 (11%)
Query: 131 FRIPLSNEIVLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPF 190
+ P N V++GH V ++A D S +GS D T++++D +L +E
Sbjct: 162 WHAPWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIE-- 219
Query: 191 EGHQVRNLSWSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLT 250
QVR L+ S Q K +D ++ + IR GH++G+
Sbjct: 220 ---QVRGLAVSNRHTYMFSAGDDKQVKCWD---------LEQNKVIRSY---HGHLSGVY 264
Query: 251 WGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCI 310
HP + +LT D R+WD+ +++ Q+ LS + T D + +
Sbjct: 265 CLALHPTL-DVLLTGGRDSVCRVWDI---RTKMQIF--ALSGHDNTVCSVFTRPTDPQVV 318
Query: 311 AGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLK 366
G D +I+ W+++ G H H+ + +T E S S D + K
Sbjct: 319 TGS-HDTTIKFWDLRYGKTMSTLTH----HKKSVRAMTLHPKENAFASASADNTKK 369
>AT3G42660.1 | Symbols: | nucleotide binding |
chr3:14762266-14766687 FORWARD
Length = 953
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 36/244 (14%)
Query: 140 VLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLS 199
+L+ H V++LA+ + + + SGS D+ V++Y F + R P +R L+
Sbjct: 57 ILRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLP-----IRVLA 111
Query: 200 WSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAK 259
++ S GS A D +G+ L G + +R LK KG +TGL ++HP
Sbjct: 112 FNGS--------GSLLAAAGDDEGIKLINTFDGSI-VRVLKGHKGPVTGL---DFHPNG- 158
Query: 260 ETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVP--------VNTCTWNHDGKCIA 311
E + + G++ W++ Q V+ L G P VN W+ DG+ +A
Sbjct: 159 ELLASIDTTGTVLCWEL-----QNGVVSFTLK--GVAPDTGFNTSIVNIPRWSPDGRTLA 211
Query: 312 GGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLR 371
+ +++ G + H + I LT++ + + + + D + +WD+
Sbjct: 212 VPGLRNDVVMYDRFTG---EKLFALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLWDVD 268
Query: 372 KTKD 375
K +D
Sbjct: 269 KKQD 272
>AT5G64630.2 | Symbols: NFB01, NFB1, MUB3, FAS2 | FAS2 (FASCIATA 2);
nucleotide binding | chr5:25850524-25853384 FORWARD
Length = 487
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 253 EWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRV-----PVNTCTWNHDG 307
++HP + + T+ D +++W +N +++K+V P +S + VNT ++ G
Sbjct: 20 DFHPISG-LLATAGADYDIKLWLINSGQAEKKV--PSVSYQSSLTYHGCAVNTIRFSPSG 76
Query: 308 KCIAGGIGDGSIQIWNIKPGWGSRP-DIHIEKS-HEDDITGLTFSSDERILLSRSFDGSL 365
+ +A G G + IW + P ++ +H S H D+ L +S D+ L+S S D S
Sbjct: 77 ELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSC 136
Query: 366 KVWDLRK 372
+WD+ K
Sbjct: 137 IIWDVNK 143
>AT5G64730.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:25890372-25892247 FORWARD
Length = 299
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 137/317 (43%), Gaps = 43/317 (13%)
Query: 133 IPLSNEIVLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYD-FQGMNSRLQSFRQLEPFE 191
+P +LKGH V A + G+ L+ D T+R+++ +G+ +++++
Sbjct: 6 LPTKEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGI--LIKTYKS----H 59
Query: 192 GHQVRNLSWSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTW 251
G +VR++ + +F G Q +D ++ G IR + G + + +
Sbjct: 60 GREVRDVHVTSDNAKFCSCGGDRQVYYWD---VSTGRV------IRKFRGHDGEVNAVKF 110
Query: 252 GEWHPKAKETILTSSEDGSLRIWDVNDFKSQ-KQVIKPKLSRPGRVPVNTCTWNHDGKCI 310
+ + ++++ D SLR+WD + Q+I L V + I
Sbjct: 111 ND----SSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTE-------I 159
Query: 311 AGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDL 370
GG DG+++ ++++ G + + + ++ S+D +L+ D +L++ D
Sbjct: 160 IGGSVDGTVRTFDMRIGR------EMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLD- 212
Query: 371 RKTKDALKVFEDLPNNYAQTNIAFSPDEQLFFTGTSVERESTTGGLLCFFDRLNLDLVSR 430
R T + L+V++ + +T+ + + G+ GL+ F+D ++ ++S+
Sbjct: 213 RTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSE-------DGLVFFWDLVDAKVLSK 265
Query: 431 VGIAPTSSVIRCSWHPK 447
A V S+HPK
Sbjct: 266 FR-AHDLVVTSVSYHPK 281
>AT2G41500.1 | Symbols: LIS, EMB2776 | EMB2776/LIS (LACHESIS);
nucleotide binding | chr2:17311397-17313933 REVERSE
Length = 554
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 87/212 (41%), Gaps = 27/212 (12%)
Query: 197 NLSWSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHP 256
++ +SP D + AK++ DG L F +GH+ L +HP
Sbjct: 303 DVVFSPVDDCLATASADRTAKLWKTDGTLLQTF-------------EGHLDRLARVAFHP 349
Query: 257 KAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGD 316
K + T+S D + R+WD+N + +++ SR V + DG A D
Sbjct: 350 SGK-YLGTTSYDKTWRLWDIN--TGAELLLQEGHSRS----VYGIAFQQDGALAASCGLD 402
Query: 317 GSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKDA 376
++W+++ G I + + H + + FS + L S D ++WDLR K +
Sbjct: 403 SLARVWDLRTGRS----ILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRK-S 457
Query: 377 LKVFEDLPNNYAQTNIAFSPDEQLFFTGTSVE 408
L + N +Q + + P E F S +
Sbjct: 458 LYIIPAHANLVSQ--VKYEPQEGYFLATASYD 487
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 344 ITGLTFSSDERILLSRSFDGSLKVWDLRKTKDALKVFEDLPNNYAQTNIAFSPDEQLFFT 403
+TG +FS D +IL + S G K+W++ + + + V +D + T++ FSP + T
Sbjct: 258 LTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKD--HKERATDVVFSPVDDCLAT 315
Query: 404 GTSVERES----TTGGLLCFFDRLNLDLVSRVGIAPT 436
S +R + T G LL F+ +LD ++RV P+
Sbjct: 316 A-SADRTAKLWKTDGTLLQTFEG-HLDRLARVAFHPS 350
>AT5G64630.1 | Symbols: NFB01, NFB1, MUB3, FAS2 | FAS2 (FASCIATA 2);
nucleotide binding | chr5:25850524-25853048 FORWARD
Length = 397
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 253 EWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRV-----PVNTCTWNHDG 307
++HP + + T+ D +++W +N +++K+V P +S + VNT ++ G
Sbjct: 20 DFHPISG-LLATAGADYDIKLWLINSGQAEKKV--PSVSYQSSLTYHGCAVNTIRFSPSG 76
Query: 308 KCIAGGIGDGSIQIWNIKPGWGSRP-DIHIEKS-HEDDITGLTFSSDERILLSRSFDGSL 365
+ +A G G + IW + P ++ +H S H D+ L +S D+ L+S S D S
Sbjct: 77 ELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSC 136
Query: 366 KVWDLRK 372
+WD+ K
Sbjct: 137 IIWDVNK 143
>AT1G78070.2 | Symbols: | WD-40 repeat family protein |
chr1:29360113-29363261 FORWARD
Length = 447
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 31/204 (15%)
Query: 156 SGS-RVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGH-QVRNLSWSPSADRFLCITGS 213
SGS RV++ + D TVR++D +F L F H V N+S SP + S
Sbjct: 246 SGSLRVMTANNDCTVRLFD-------ATNFALLNRFAFHWSVNNISTSPDGKLVAVLGDS 298
Query: 214 AQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKETILTSSEDGSLRI 273
+ + D G+ + G +GH+ WHP + + T ++D + R+
Sbjct: 299 PECLLADTGS---GKVIHG---------LEGHLDYSFSSAWHPNG-QILATGNQDTTCRL 345
Query: 274 WDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIKPGWGSRPD 333
WDV + +V+K + + + DG+ +A + +++ + G+ +
Sbjct: 346 WDVRNLSQSLKVLKGNMG-----AIRALRFTSDGRFLAMAEPADFVHLFDTEAGYSQCQE 400
Query: 334 IHIEKSHEDDITGLTFSSDERILL 357
I + +I G++FS D L
Sbjct: 401 IDLFG----EIAGISFSPDTEALF 420
>AT2G34260.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:14472978-14475495 FORWARD
Length = 353
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 262 ILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQI 321
I+T+S D S+ DV ++ QV L VNT N IA G G ++I
Sbjct: 66 IVTASADCSILATDV---ETGAQV--AHLENAHEDAVNTLI-NVTETTIASGDDKGCVKI 119
Query: 322 WNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKDALKVFE 381
W+ + R H +HED I+G+TF+SD L+ S DG+L V +LR +K
Sbjct: 120 WDTRQ----RSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSK------- 168
Query: 382 DLPNNYAQTNIAFSPDEQL 400
Q+ FS DE L
Sbjct: 169 ------VQSQSEFSEDELL 181
>AT2G34260.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:14473416-14475495 FORWARD
Length = 296
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 262 ILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQI 321
I+T+S D S+ DV ++ QV L VNT N IA G G ++I
Sbjct: 9 IVTASADCSILATDV---ETGAQV--AHLENAHEDAVNTLI-NVTETTIASGDDKGCVKI 62
Query: 322 WNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKDALKVFE 381
W+ + R H +HED I+G+TF+SD L+ S DG+L V +LR +K
Sbjct: 63 WDTRQ----RSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSK------- 111
Query: 382 DLPNNYAQTNIAFSPDEQL 400
Q+ FS DE L
Sbjct: 112 ------VQSQSEFSEDELL 124
>AT2G16780.1 | Symbols: MSI02, NFC02, NFC2, MSI2 | MSI2
(NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 2) |
chr2:7288697-7290665 REVERSE
Length = 415
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 18/179 (10%)
Query: 198 LSWSPSADRFLCITGSAQAKIYDRD-GLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHP 256
LSWSP + +L ++GS KI D T + + M++ + GH + + WH
Sbjct: 174 LSWSPFKEGYL-LSGSQDQKICLWDVSATPQDKVLNAMFVYE-----GHESAIADVSWHM 227
Query: 257 KAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWN-HDGKCIAGGIG 315
K + ++ EDG L IWD + Q QV + VN ++N + +A
Sbjct: 228 KNENLFGSAGEDGRLVIWDTRTNQMQHQV------KVHEREVNYLSFNPFNEWVLATASS 281
Query: 316 DGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSD-ERILLSRSFDGSLKVWDLRKT 373
D ++ +++++ +H+ SHE ++ + + + E +L S D L VWDL +
Sbjct: 282 DSTVALFDLRK---LNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRV 337
>AT1G71840.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:27026086-27028042 FORWARD
Length = 407
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 14/130 (10%)
Query: 248 GLTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDG 307
G+ W WHP+ +L SED SL +W+ + K+ S + V + DG
Sbjct: 157 GIEWVRWHPRG-HIVLAGSEDCSLWMWNAD-----KEAYLNMFSGH-NLNVTCGDFTPDG 209
Query: 308 KCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKS---HEDDITGLTFSSDERILLSRSFDGS 364
K I G D S+ +WN K + IHI K H + +T L +S+ + +S S DGS
Sbjct: 210 KLICTGSDDASLIVWNPK----TCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGS 265
Query: 365 LKVWDLRKTK 374
+ + ++ K
Sbjct: 266 VHIVNIVTGK 275
>AT1G49040.1 | Symbols: SCD1 | SCD1 (STOMATAL CYTOKINESIS-DEFECTIVE 1)
| chr1:18143087-18152494 REVERSE
Length = 1187
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 128/307 (41%), Gaps = 66/307 (21%)
Query: 136 SNEIVLKGHTKVVSAL-------AVDHSGSR-----VLSGSYDYTVRMYDFQGMNSRLQS 183
+N VLKGH V+AL D G R +SGS D V+++D S L++
Sbjct: 834 TNVRVLKGHGGAVTALHSVTRREVCDLVGDREDAGFFISGSTDCLVKIWDPSLRGSELRA 893
Query: 184 FRQLEPFEGHQ--VRNLSWSPSADRFLCITGS--AQAKIYDRDGLTLGEFMKG-DMYIRD 238
+GH VR +S +DR ++GS ++D+ L E +KG D +
Sbjct: 894 -----TLKGHTGTVRAIS----SDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSC 944
Query: 239 LKNTKGHITGLTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPV 298
+K G E +LT++ DG++++WDV V GR
Sbjct: 945 VKMLSG---------------ERVLTAAHDGTVKMWDVRTDMCVATV--------GRCSS 981
Query: 299 NTCTWNHDGK--CIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERIL 356
+ +D +A D IW+I+ G +H K H I + D L
Sbjct: 982 AILSLEYDDSTGILAAAGRDTVANIWDIRSG----KQMHKLKGHTKWIRSIRMVED--TL 1035
Query: 357 LSRSFDGSLKVWDL-RKTKDALKVFEDLPNNYAQTNIAFSPDEQLFFTGTS--VER--ES 411
++ S D + +VW + R + DA+ P ++ +SP ++ TG++ + R E+
Sbjct: 1036 ITGSDDWTARVWSVSRGSCDAVLACHAGPVQ----SVEYSPFDKGIITGSADGLLRFWEN 1091
Query: 412 TTGGLLC 418
GG+ C
Sbjct: 1092 DEGGIKC 1098
>AT2G47410.1 | Symbols: | nucleotide binding |
chr2:19456203-19464061 FORWARD
Length = 1520
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 91/229 (39%), Gaps = 39/229 (17%)
Query: 141 LKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSW 200
L+GH V D SG V++GS D V+++ +++ L GH+
Sbjct: 232 LRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWS-------METALCLASCRGHEGDITDL 284
Query: 201 SPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKE 260
+ S++ L + S D + + M I L+ G +T + + +
Sbjct: 285 AVSSNNALVASAS-------NDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQ 337
Query: 261 TILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNT--------------CTWNHD 306
+L+SS+DG+ RIWD ++ P++ P NT C +N +
Sbjct: 338 -LLSSSDDGTCRIWD-----ARYSQWLPRIYVPSPSDANTGSTSNASQSHQILCCAYNAN 391
Query: 307 GKCIAGGIGDGSIQIW-----NIKPGWGSRPDIHIEKSHEDDITGLTFS 350
G G D + ++W N+ ++ + + HE+D+ + FS
Sbjct: 392 GTIFVTGSSDSNARVWSASKPNLDDAEQPTHELDVLRGHENDVNYVQFS 440
>AT1G19750.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:6826988-6830052 FORWARD
Length = 450
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 19/157 (12%)
Query: 240 KNTKGHITGLTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRV--- 296
++ GH ++ W+P +T S D +++WD N + + V+ K+ PG+V
Sbjct: 97 QHENGHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTN---TSQVVVDFKM--PGKVYRT 151
Query: 297 PVNTCTWNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFS-SDERI 355
+++ +H IA G D +++ +I G S H H D + + +S S E +
Sbjct: 152 AMSSMAMSH--TLIAAGTDDVQVRLCDIASGAFS----HTLSGHRDGVMSVEWSTSSEWV 205
Query: 356 LLSRSFDGSLKVWDLRKTKDALKVFEDLPNNYAQTNI 392
L + DG+++ WD+R+ F L N+ Q +
Sbjct: 206 LYTGGCDGAIRFWDIRRA----GCFRVLDNSQTQLGV 238
>AT1G73720.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:27728720-27733383 FORWARD
Length = 511
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 262 ILTSSEDGSLRIWDVNDFKSQK--QVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSI 319
+ +SS DG + +WD K +K Q + PV ++ D + +A G DG I
Sbjct: 228 LASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKI 287
Query: 320 QIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTK 374
+IW I+ G R +H +T L+FS D LLS SFD + ++ L+ K
Sbjct: 288 KIWRIRTGVCIRR----FDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGK 338
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 27/230 (11%)
Query: 143 GHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQ--VRNLSW 200
H++ V++L+ GS++LS S+D T R++ L+S + L+ F GH V + +
Sbjct: 303 AHSQGVTSLSFSRDGSQLLSTSFDQTARIHG-------LKSGKLLKEFRGHTSYVNHAIF 355
Query: 201 SPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKE 260
+ R + + K++D + K L+ T + + PK E
Sbjct: 356 TSDGSRIITASSDCTVKVWDSKTTDCLQTFKPP---PPLRGTDASVNSI---HLFPKNTE 409
Query: 261 TILTSSEDGSLRIWDVNDFKSQKQVIKPKLS--RPGRVPVNTCTWNHDGKCIAGGIGDGS 318
I+ ++ S+ I + Q QV+K S R G V C + G I D
Sbjct: 410 HIVVCNKTSSIYIMTL-----QGQVVKSFSSGNREGGDFVAACV-STKGDWIYCIGEDKK 463
Query: 319 IQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVW 368
+ +N + G H HE D+ G+T +L + S D ++K+W
Sbjct: 464 LYCFNYQSGGLE----HFMMVHEKDVIGITHHPHRNLLATYSEDCTMKLW 509
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 12/117 (10%)
Query: 306 DGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKS-----HEDDITGLTFSSDERILLSRS 360
DG+ +A DG I++W+ G + D+ + H+D + + FS D +L S S
Sbjct: 224 DGQFLASSSVDGFIEVWDYISG-KLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGS 282
Query: 361 FDGSLKVWDLRKTKDALKVFEDLPNNYAQTNIAFSPD-EQLFFTGTSVERESTTGGL 416
DG +K+W +R T ++ F+ ++ T+++FS D QL TS ++ + GL
Sbjct: 283 QDGKIKIWRIR-TGVCIRRFD--AHSQGVTSLSFSRDGSQLL--STSFDQTARIHGL 334
>AT2G26060.1 | Symbols: EMB1345 | EMB1345 (EMBRYO DEFECTIVE 1345);
nucleotide binding | chr2:11109478-11112205 FORWARD
Length = 352
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 110/253 (43%), Gaps = 41/253 (16%)
Query: 141 LKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGH--QVRNL 198
L+GH V +++ + SGS + + S D +V +++ N + GH V+ +
Sbjct: 114 LEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNE----YDCAAVLTGHTQDVKMV 169
Query: 199 SWSPSADRFLCITGSAQAKIY---DRDG-----LTLGEFMKGDMYIRDLKNTKGHITGLT 250
W P+ D + K++ D DG TLGE + GH +
Sbjct: 170 QWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGE------------SNNGH-SSTV 216
Query: 251 WGEWHPKAKETILTSSEDGSLRIWDVNDFKSQK------QVIKPKLSRPGRVPVNTCTWN 304
W A + ++T S+D +L+IW + K Q + LS + + W+
Sbjct: 217 WSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWS 276
Query: 305 HDGKCIAGGIGDGSIQIW-NIKPGWGSRPDIHI----EKSHEDDITGLTFSSDE--RILL 357
D IA G GD +I+++ + K P ++ K+HE+D+ + +S E R+L
Sbjct: 277 RD-DIIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLA 335
Query: 358 SRSFDGSLKVWDL 370
S S DG +K+W L
Sbjct: 336 SASDDGMVKIWQL 348
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 82/195 (42%), Gaps = 28/195 (14%)
Query: 186 QLEPFEGH--QVRNLSWSPSADR-------FLCITGSAQAKIYDRDGLTLGEFMKG---D 233
+++ EGH +V +++W+P + +G +I+++ L+ K +
Sbjct: 12 EIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEE 71
Query: 234 MYIRDLKNTKGHITGLTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRP 293
+ R +++ W P + + T+S DG+ IW ++ S+ + I
Sbjct: 72 THTRTVRSCA----------WSPSG-QLLATASFDGTTGIW--KNYGSEFECISTLEGHE 118
Query: 294 GRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDE 353
V + +WN G C+A D S+ IW + G + H D+ + +
Sbjct: 119 NEVK--SVSWNASGSCLATCSRDKSVWIWEVLEG-NEYDCAAVLTGHTQDVKMVQWHPTM 175
Query: 354 RILLSRSFDGSLKVW 368
+L S S+D ++KVW
Sbjct: 176 DVLFSCSYDNTIKVW 190
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 17/151 (11%)
Query: 139 IVLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGH--QVR 196
++ + HT+ V + A SG + + S+D T ++ G F + EGH +V+
Sbjct: 68 VLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYG-----SEFECISTLEGHENEVK 122
Query: 197 NLSWSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHP 256
++SW+ S GS A + + E ++G+ Y T GH + +WHP
Sbjct: 123 SVSWNAS--------GSCLATCSRDKSVWIWEVLEGNEYDCAAVLT-GHTQDVKMVQWHP 173
Query: 257 KAKETILTSSEDGSLRIWDVNDFKSQKQVIK 287
+ + + S D ++++W D + Q ++
Sbjct: 174 -TMDVLFSCSYDNTIKVWWSEDDDGEYQCVQ 203
>AT4G04940.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:2511210-2517050 REVERSE
Length = 910
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 43/229 (18%)
Query: 159 RVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSWSPSADRFLCITGSAQAKI 218
R L+ DYT F + + FR+ HQV +WS + + +
Sbjct: 60 RALASYRDYT-----FVAFGNEIAVFRR-----AHQVA--TWSKHVAKVDLLL------V 101
Query: 219 YDRDGLTLGEFMKGDMYIRDLKNTKGHITGL----TWGEWHPKA-------KETILTSSE 267
+ L+L ++G+M+I K + H+ + G++ P + +L S+
Sbjct: 102 FGEHVLSLD--VEGNMFIWAFKGIEEHLAPIGNLQLTGKFTPTSIVHPDTYLNKVLVGSQ 159
Query: 268 DGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIKPG 327
+G L++W++N K Q + V +C + +A G DG I + NIK
Sbjct: 160 EGPLQLWNINTKKMLYQF------KGWGSSVTSCVSSPALDVVAIGCADGKIHVHNIKL- 212
Query: 328 WGSRPDIHIEKSHEDDITGLTFSSDERILLSR--SFDGSLKVWDLRKTK 374
+ E + +T L+FS+D R LL+ SF G + +W+L K +
Sbjct: 213 --DEEIVTFEHASRGAVTALSFSTDGRPLLASGGSF-GVISIWNLNKKR 258
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 273 IWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIKPGW--GS 330
+W + +F + ++KP P P+ C + G G G I+ +N++ G GS
Sbjct: 404 VWRLQNFVLGEHILKPCPENP--TPIKACAISACGNFAVVGTAGGWIERFNLQSGISRGS 461
Query: 331 RPDIHIEK--SHEDDITGLTFSSDERILLSRSFDGSLKVWDLRK 372
D+ ++ +H+ ++ G+ S +++S + G LKVWD +K
Sbjct: 462 YFDMSEKRRYAHDGEVIGVACDSTNTLMISAGYHGDLKVWDFKK 505
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 338 KSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKDALKVFEDLPNNYAQTNIAFSPD 397
+ H D IT L FS D + ++S S DGSL++WD+ K V D+P T ++ SP+
Sbjct: 554 RGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQIDGVHVDVP----ITALSLSPN 609
Query: 398 EQLFFTGTS 406
+ T S
Sbjct: 610 MDVLATAHS 618
>AT2G46290.1 | Symbols: | eukaryotic translation initiation factor
3 subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative | chr2:19012983-19014870 REVERSE
Length = 355
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 21/237 (8%)
Query: 139 IVLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNL 198
I++KGH + ++ L + +G + S + D+T ++ F RL ++R GH
Sbjct: 31 ILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVW-FADNGERLGTYR------GHSGAVW 83
Query: 199 SWSPSADRFLCITGSAQ--AKIYD-RDGLTLGEFMKGDMYIRDLKNTKG-HITGLTWGEW 254
S D ITGSA AK++D + G L F G R + + G H+ +T +
Sbjct: 84 CCDISRDSSRLITGSADQTAKLWDVKSGKELFTFKFG-APARSVDFSVGDHLAVITTDHF 142
Query: 255 HPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGI 314
+ TSS RI + + + V+ + S G+ +N W + I G
Sbjct: 143 -------VGTSSAIHVKRIAEDPEDQVGDSVLVLQ-SPDGKKKINRAVWGPLNQTIVSGG 194
Query: 315 GDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLR 371
D +I+IW+ + G + E H++ IT L ++D+ L+ S D + K+WD+R
Sbjct: 195 EDAAIRIWDAETGKLLKQSDE-EVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMR 250
>AT5G23430.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:7894076-7899865 REVERSE
Length = 837
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 244 GHITGLTWGEWHPKAKETILTS-SEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCT 302
GH +G+ + A E ++ + + G++++WD+ + K + + R + V+
Sbjct: 57 GHSSGIDSVTF--DASEVLVAAGAASGTIKLWDLEEAKIVRTLTG---HRSNCISVD--- 108
Query: 303 WNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFD 362
++ G+ A G D +++IW+I+ + IH K H + L F+ D R ++S D
Sbjct: 109 FHPFGEFFASGSLDTNLKIWDIR----KKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGED 164
Query: 363 GSLKVWDLRKTKDALKVFEDLPNNYAQT-NIAFSPDEQLFFTGTSVERESTTGGLLCFFD 421
+KVWDL A K+ + ++ Q ++ F P E L TG S +R + F+D
Sbjct: 165 NIVKVWDL----TAGKLLTEFKSHEGQIQSLDFHPHEFLLATG-SADR------TVKFWD 213
Query: 422 RLNLDLVSRVGIAPTSSVIRC-SWHP 446
+L+ G P ++ +RC S++P
Sbjct: 214 LETFELIGSGG--PETAGVRCLSFNP 237
>AT5G23430.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:7894076-7899865 REVERSE
Length = 836
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 244 GHITGLTWGEWHPKAKETILTS-SEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCT 302
GH +G+ + A E ++ + + G++++WD+ + K + + R + V+
Sbjct: 57 GHSSGIDSVTF--DASEVLVAAGAASGTIKLWDLEEAKIVRTLTG---HRSNCISVD--- 108
Query: 303 WNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFD 362
++ G+ A G D +++IW+I+ + IH K H + L F+ D R ++S D
Sbjct: 109 FHPFGEFFASGSLDTNLKIWDIR----KKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGED 164
Query: 363 GSLKVWDLRKTKDALKVFEDLPNNYAQT-NIAFSPDEQLFFTGTSVERESTTGGLLCFFD 421
+KVWDL A K+ + ++ Q ++ F P E L TG S +R + F+D
Sbjct: 165 NIVKVWDL----TAGKLLTEFKSHEGQIQSLDFHPHEFLLATG-SADR------TVKFWD 213
Query: 422 RLNLDLVSRVGIAPTSSVIRC-SWHP 446
+L+ G P ++ +RC S++P
Sbjct: 214 LETFELIGSGG--PETAGVRCLSFNP 237
>AT5G13480.1 | Symbols: FY | FY | chr5:4326641-4331560 REVERSE
Length = 647
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 26/188 (13%)
Query: 137 NEIVLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQ-- 194
+E L GH V ++ + S ++SG D V+++D +S R+L GH+
Sbjct: 241 DESSLTGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWD-------TRSGRELCSLHGHKNI 293
Query: 195 VRNLSWSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEW 254
V ++ W+ + + L + K+YD + ++L++ +GH +T W
Sbjct: 294 VLSVKWNQNGNWLLTASKDQIIKLYDIRTM------------KELQSFRGHTKDVTSLAW 341
Query: 255 HPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGI 314
HP +E ++ S DGS+ W V Q ++ + V W+ G + G
Sbjct: 342 HPCHEEYFVSGSSDGSICHWIVGHENPQIEIPNAHDNS-----VWDLAWHPIGYLLCSGS 396
Query: 315 GDGSIQIW 322
D + + W
Sbjct: 397 NDHTTKFW 404
>AT3G44530.1 | Symbols: HIRA | HIRA (ARABIDOPSIS HOMOLOG OF HISTONE
CHAPERONE HIRA); nucleotide binding / protein binding |
chr3:16127013-16132234 FORWARD
Length = 1058
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 18/130 (13%)
Query: 260 ETILTSSEDGSLRIWDVNDFKSQKQVIKPK-----LSRPGRVPVNTCTWNHDGKCIAGGI 314
E T D +RIW++ Q I K R VN W + + +A G
Sbjct: 26 ERFATGGGDHKVRIWNMKSVDKDLQNIDTKERLLATLRDHFGSVNCVRWAKNSRYVASGS 85
Query: 315 GDGSIQIWNIKPGWGSR-------PDIHIEKS------HEDDITGLTFSSDERILLSRSF 361
D IQI KPG G+ PD+ K+ H D+ L +S D+ +L S S
Sbjct: 86 DDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSL 145
Query: 362 DGSLKVWDLR 371
D ++ +W++R
Sbjct: 146 DNTVHIWNMR 155
>AT3G18130.1 | Symbols: | guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) |
chr3:6211115-6212377 REVERSE
Length = 326
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 32/244 (13%)
Query: 141 LKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSW 200
L GH+ V + + G LSGS+D +R++D L + F GH LS
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD-------LATGETTRRFVGHTKDVLSV 111
Query: 201 SPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKE 260
+ S D ++ S I + TLGE + GH ++ + P
Sbjct: 112 AFSTDNRQIVSASRDRTIKLWN--TLGECK------YTISEGDGHKEWVSCVRFSPNTLV 163
Query: 261 -TILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSI 319
TI+++S D ++++W++ + K + ++ G +NT + DG A G DG I
Sbjct: 164 PTIVSASWDKTVKVWNLQNCKLRNSLV----GHSGY--LNTVAVSPDGSLCASGGKDGVI 217
Query: 320 QIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKDALKV 379
+W++ G + +E I L FS + R L + + S+++WDL ++ V
Sbjct: 218 LLWDLAEG---KKLYSLEAGSI--IHSLCFSPN-RYWLCAATENSIRIWDL----ESKSV 267
Query: 380 FEDL 383
EDL
Sbjct: 268 VEDL 271
>AT4G32990.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:15920233-15922437 FORWARD
Length = 318
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 35/199 (17%)
Query: 228 EFMKGDMYIRDLKNTKGHITGLTWG-EWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVI 286
+ M ++ + +++ +GH T W W+P A I + S D ++RIW+ + S +
Sbjct: 2 KVMDKNLGLEEVQKLEGH-TDRVWNVAWNPAADGVIASCSADKTVRIWEQS---SLTRSW 57
Query: 287 KPKLS-RPGRVPVNTC-------------------------TWNHDGKCIAGGIGDGSIQ 320
KL R G NTC +WN G +A D S+
Sbjct: 58 TCKLGHRLGSFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVW 117
Query: 321 IWNIKPGWGSRPD-IHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVW---DLRKTKDA 376
IW I+P D I + H +D+ + + +L S S+D ++K+W D +
Sbjct: 118 IWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNC 177
Query: 377 LKVFEDLPNNYAQTNIAFS 395
++ +L N ++ T + S
Sbjct: 178 VQTLSELNNGHSSTVWSIS 196
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 53/242 (21%)
Query: 140 VLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQ--VRN 197
VL+GH V +++ + SGS + + D +V +++ Q F + GH V+
Sbjct: 87 VLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEED--DEFDTIAVLTGHSEDVKM 144
Query: 198 LSWSPSADRFLCITGSAQAKIY---DRDG-----LTLGEFMKGDMYIRDLKNTKGHITGL 249
+ W P+ D + KI+ D DG TL E GH +
Sbjct: 145 VLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSEL------------NNGH-SST 191
Query: 250 TWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVP-VNTCT------ 302
W A + ++T S+D +++IW K I S G VP + CT
Sbjct: 192 VWSISFNAAGDKMVTCSDDLAVKIW--------KTDISRMQSGEGYVPWTHVCTLSGFHD 243
Query: 303 -------WNHDGKCIAGGIGDGSIQIW-----NIKPGWGSRPDIHIEKSHEDDITGLTFS 350
W+ DG IA G GD +IQ++ + G + + EK+HE D+ + ++
Sbjct: 244 RTIYSVHWSRDG-VIASGAGDDTIQLFVDSDSDSVDGPSYKLLVKKEKAHEMDVNSVQWA 302
Query: 351 SD 352
D
Sbjct: 303 PD 304
>AT3G15880.2 | Symbols: WSIP2, TPR4 | TPR4/WSIP2 (TOPLESS-RELATED 4)
| chr3:5364460-5371875 REVERSE
Length = 1137
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 20/147 (13%)
Query: 260 ETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNH--DGKCIAGGIGDG 317
++ + S+ G + ++++ FK+ + P P T H D IA G+ D
Sbjct: 857 DSYVMSASGGKISLFNMMTFKTMTTFMAPP-------PAATSLAFHPQDNNIIAIGMDDS 909
Query: 318 SIQIWNIKPGWGSRPDIHIE-KSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRK-TKD 375
SIQI+N++ ++ + K H+ +TGL FS+ +L+S D L VW + K
Sbjct: 910 SIQIYNVRVD-----EVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWEKQ 964
Query: 376 ALKVFE----DLPNNYAQTNIAFSPDE 398
A K + PN A T + F D+
Sbjct: 965 ASKQIQIPSGHSPNPLAHTRVQFHQDQ 991
>AT3G15880.1 | Symbols: WSIP2, TPR4 | TPR4/WSIP2 (TOPLESS-RELATED
4); protein binding | chr3:5364798-5371875 REVERSE
Length = 1135
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 20/147 (13%)
Query: 260 ETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNH--DGKCIAGGIGDG 317
++ + S+ G + ++++ FK+ + P P T H D IA G+ D
Sbjct: 857 DSYVMSASGGKISLFNMMTFKTMTTFMAPP-------PAATSLAFHPQDNNIIAIGMDDS 909
Query: 318 SIQIWNIKPGWGSRPDIHIE-KSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRK-TKD 375
SIQI+N++ ++ + K H+ +TGL FS+ +L+S D L VW + K
Sbjct: 910 SIQIYNVRVD-----EVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWEKQ 964
Query: 376 ALKVFE----DLPNNYAQTNIAFSPDE 398
A K + PN A T + F D+
Sbjct: 965 ASKQIQIPSGHSPNPLAHTRVQFHQDQ 991
>AT3G49400.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:18330234-18335358 REVERSE
Length = 892
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 26/177 (14%)
Query: 246 ITGLTWGEW---HPKAKETILTSSEDGSLRIWDVN--DFKSQKQVIKPKLSRPGRV---- 296
++ ++WG + + ++T S DGS++IW N D ++ +V K V
Sbjct: 326 VSTMSWGIFGCDSSNPQVVLVTGSCDGSVKIWMSNKEDLQNSVEVYKSSFFLLKEVVAVN 385
Query: 297 PVNTCTW-----NH-DGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFS 350
PV T NH + +A G G GS ++W + I +H +TGL +S
Sbjct: 386 PVQVSTLSFVVSNHYNAMHLAIGKGSGSFEVWKCEISTRKFEQIVSTNAHNQVVTGLAWS 445
Query: 351 SDERILLSRSFDGSLKVWDLRKTKDA----------LKVFEDLPNNYAQT-NIAFSP 396
D R L S S D ++ W L + + L DLP+++ +A SP
Sbjct: 446 YDGRCLYSCSQDNYVRSWILCENAISEVPIPANTPGLSSTTDLPDDFLSCLGVALSP 502
>AT5G54520.1 | Symbols: | WD-40 repeat family protein |
chr5:22164007-22166315 REVERSE
Length = 457
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 72/159 (45%), Gaps = 12/159 (7%)
Query: 227 GEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVI 286
G ++ +M R + GH +T +W + ++ DG++ +W+V + + K+ +
Sbjct: 141 GSSLQTEMPSRMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNV--WSNDKKKV 198
Query: 287 KPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITG 346
+ L PV W+ G + D + ++++++ G + + ED++ G
Sbjct: 199 RAFLHH--NAPVKDVKWSKQGLSLLSCGYDCTSRLFDVERG------VETQSFKEDEVVG 250
Query: 347 LT-FSSDE-RILLSRSFDGSLKVWDLRKTKDALKVFEDL 383
+ F D + LS GSL++WD+R K + DL
Sbjct: 251 VVKFHPDNCNVFLSGGSKGSLRLWDIRANKFVHEYVRDL 289
>AT4G00090.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:34234-36594 FORWARD
Length = 430
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 142/374 (37%), Gaps = 68/374 (18%)
Query: 141 LKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLE-PFEGHQVRNLS 199
LKGH V+ L G + + D +R++ +S+ F ++ P GH
Sbjct: 82 LKGHGDAVTGLCFSSDGKSLATACADGVIRVFKLDDASSKSFKFLRINLPAGGH------ 135
Query: 200 WSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAK 259
P+A F S + G +L +M G+ +D + K + + W H K
Sbjct: 136 --PTAVAFADDASSIVVACHHMSGSSL--YMYGEDKQKD-QQGKLPLPSIKWDHHHIHEK 190
Query: 260 ETILTSS--------EDGSLRIWDVNDFKSQKQVIKPKLSRP-GRVPVNTCTWNH----- 305
++LT S DGS+ I ++ + + K R G V N NH
Sbjct: 191 RSVLTISGATATYGTADGSVVIASCSE-GTDIVLWHGKTGRNLGHVDTNQLK-NHMAAVS 248
Query: 306 -DGKCIAGGIGDGSIQIWNI---KPGWGSRPDIHIE-KSHEDDITGLTFSSDERILLSRS 360
+G+ +A +++W I K G ++ K H+ +T L FS + +++ S
Sbjct: 249 PNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITAS 308
Query: 361 FDGSLKVWDLRKTKDALKVFEDLPNNYAQTNIAFSPDEQLFFTGTSVERESTTGGLLCFF 420
DGS++VW++ N+ + DE +GG +
Sbjct: 309 KDGSIRVWNI--------------------NVRYHLDEDPKTLKVFPIPLCDSGGNPLHY 348
Query: 421 DRLNLDLVSRVGIAPTSSVIRCSWHPKLNQIFATVGDKSQGGTHILYDPTISEKGALVCV 480
DRL+L P ++ S L + A G+ +L + +G + C+
Sbjct: 349 DRLSL--------CPEGKILAASHGSTLQWLCAETGN-------VLDTAEKAHEGDITCI 393
Query: 481 ARAPRKKSVDDFEA 494
+ AP+ +V + A
Sbjct: 394 SWAPKAITVGERHA 407
>AT3G21540.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:7586106-7590862 REVERSE
Length = 955
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 27/156 (17%)
Query: 258 AKETILTSSEDGSLRIWDVN------DFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIA 311
A + DGS+RIWD +F S K V +N G +A
Sbjct: 75 ASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKG------------AVTALRYNKVGSMLA 122
Query: 312 GGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLR 371
G D I +W++ G + + H D +T L F + L+S S D L+VWDL
Sbjct: 123 SGSKDNDIILWDVVGESG----LFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDL- 177
Query: 372 KTKDALKVFEDLPNNYAQT-NIAFSPDEQLFFTGTS 406
+T+ +++ + ++++ ++ P+E+ TG++
Sbjct: 178 ETQHCMQI---VSGHHSEVWSVDTDPEERYVVTGSA 210
>AT3G16650.1 | Symbols: | PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) | chr3:5671139-5675112 FORWARD
Length = 479
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 95/242 (39%), Gaps = 49/242 (20%)
Query: 131 FRIPLSNEIVLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPF 190
+ P N VL+GH V ++A D S +GS D T++++D +L
Sbjct: 156 WHAPWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLT-------L 208
Query: 191 EGH--QVRNLSWSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITG 248
GH QVR L+ S Q K +D ++ + IR + GH+ G
Sbjct: 209 TGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWD---------LEQNKVIR---SYHGHLHG 256
Query: 249 LTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQV--------IKPKLSRPGRVPVNT 300
+ HP + +LT D R+WD+ +++ Q+ + L+RP
Sbjct: 257 VYCLALHPTL-DVVLTGGRDSVCRVWDI---RTKMQIFVLPHDSDVFSVLARPT------ 306
Query: 301 CTWNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRS 360
D + I G D +I+ W+++ G + +H+ + + E +S S
Sbjct: 307 -----DPQVITGS-HDSTIKFWDLRYG----KSMATITNHKKTVRAMALHPKENDFVSAS 356
Query: 361 FD 362
D
Sbjct: 357 AD 358
>AT1G48630.1 | Symbols: | guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative | chr1:17985645-17986936 REVERSE
Length = 326
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 32/244 (13%)
Query: 141 LKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSW 200
+ GH+ V + + G LSGS+D +R++D L + F GH LS
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWD-------LATGESTRRFVGHTKDVLSV 111
Query: 201 SPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKE 260
+ S D ++ S I + TLGE + GH ++ + P
Sbjct: 112 AFSTDNRQIVSASRDRTIKLWN--TLGECK------YTISEADGHKEWVSCVRFSPNTLV 163
Query: 261 -TILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSI 319
TI+++S D ++++W++ + K + + G +NT + DG A G DG I
Sbjct: 164 PTIVSASWDKTVKVWNLQNCKLRNTLA----GHSGY--LNTVAVSPDGSLCASGGKDGVI 217
Query: 320 QIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKDALKV 379
+W++ G + +E I L FS + R L + + S+++WDL ++ V
Sbjct: 218 LLWDLAEG---KKLYSLEAGSI--IHSLCFSPN-RYWLCAATENSIRIWDL----ESKSV 267
Query: 380 FEDL 383
EDL
Sbjct: 268 VEDL 271
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 260 ETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSI 319
+ I+TSS D S+ +W + V + +++ V + DG+ G DG +
Sbjct: 29 DVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHF-VQDVVLSSDGQFALSGSWDGEL 87
Query: 320 QIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWD 369
++W++ G +R + H D+ + FS+D R ++S S D ++K+W+
Sbjct: 88 RLWDLATGESTRRFV----GHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
>AT3G49180.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:18240795-18242859 FORWARD
Length = 438
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Query: 297 PVNTCTWNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERIL 356
P+ N++G + GG G I +W + G + H +T L FS D+ +L
Sbjct: 80 PIKALAANNEGTYLVGGGISGDIYLWEVATG----KLLKKWHGHYRSVTCLVFSGDDSLL 135
Query: 357 LSRSFDGSLKVWDLRKTKDALKVFEDLPNNYAQT 390
+S S DGS++VW L +++F+D T
Sbjct: 136 VSGSQDGSIRVWSL------IRLFDDFQRQQGNT 163
>AT5G16750.1 | Symbols: TOZ | TOZ (TORMOZEMBRYO DEFECTIVE);
nucleotide binding | chr5:5504544-5509269 REVERSE
Length = 876
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 141 LKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSW 200
++G + ++ALA+ + S + +R++D L++ + + ++GH+ +
Sbjct: 56 IEGESDTLTALALSPDDKLLFSAGHSRQIRVWD-------LETLKCIRSWKGHEGPVMGM 108
Query: 201 SPSADRFLCITGSAQAKI--YDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKA 258
+ A L T A K+ +D DG + +G KG ++ + + HP +
Sbjct: 109 ACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGH---------KGVVSSILF---HPDS 156
Query: 259 KETILTS-SEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDG 317
+ IL S S+D ++R+WD+N ++K+ + + V + + DG + D
Sbjct: 157 NKNILISGSDDATVRVWDLNAKNTEKKCL--AIMEKHFSAVTSIALSEDGLTLFSAGRDK 214
Query: 318 SIQIWNI 324
+ +W++
Sbjct: 215 VVNLWDL 221
>AT2G33340.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:14133540-14138076 REVERSE
Length = 537
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 24/228 (10%)
Query: 148 VSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSWSPSADRF 207
+ ++ + HS + +G D T ++D S + L GH + S D
Sbjct: 225 ICSMDILHSKDVIATGGVDATAVLFD-------RPSGQILSTLTGHSKKVTSVKFVGDSD 277
Query: 208 LCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKETILTSSE 267
L +T SA + G + G L + + +T HP K +++S
Sbjct: 278 LVLTASADKTVRIWRNPGDGNYACG----YTLNDHSAEVRAVTV---HPTNKY-FVSASL 329
Query: 268 DGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIKPG 327
DG+ +D++ QV V ++ DG + G ++IW++K
Sbjct: 330 DGTWCFYDLSSGSCLAQVSDDS----KNVDYTAAAFHPDGLILGTGTSQSVVKIWDVK-- 383
Query: 328 WGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKD 375
S+ ++ H ++T ++FS + L + + DG +++WDLRK ++
Sbjct: 384 --SQANVAKFDGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRKLRN 428
>AT2G33340.3 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:14133779-14138076 REVERSE
Length = 485
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 24/228 (10%)
Query: 148 VSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSWSPSADRF 207
+ ++ + HS + +G D T ++D S + L GH + S D
Sbjct: 225 ICSMDILHSKDVIATGGVDATAVLFD-------RPSGQILSTLTGHSKKVTSVKFVGDSD 277
Query: 208 LCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKETILTSSE 267
L +T SA + G + G L + + +T HP K +++S
Sbjct: 278 LVLTASADKTVRIWRNPGDGNYACG----YTLNDHSAEVRAVTV---HPTNK-YFVSASL 329
Query: 268 DGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIKPG 327
DG+ +D++ QV V ++ DG + G ++IW++K
Sbjct: 330 DGTWCFYDLSSGSCLAQVSDDS----KNVDYTAAAFHPDGLILGTGTSQSVVKIWDVK-- 383
Query: 328 WGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKD 375
S+ ++ H ++T ++FS + L + + DG +++WDLRK ++
Sbjct: 384 --SQANVAKFDGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRKLRN 428
>AT5G50650.1 | Symbols: | WD-40 repeat family protein / St12p
protein, putative | chr5:20627438-20629287 FORWARD
Length = 383
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 105/235 (44%), Gaps = 28/235 (11%)
Query: 150 ALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSWSPSADRFLC 209
+L+ + G+ + +G+ D T+R++++ M + L E V++L++S S +FL
Sbjct: 147 SLSFNQDGTVLATGAEDGTLRVFEWPSMKTLLN-----ESKTHASVKSLTFSESG-KFLV 200
Query: 210 ITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKETILTSSED- 268
G+ +++D + I L K + E + ++
Sbjct: 201 SLGAPLCRVWD---------VNASAAIASLSKEKDEMFASCRFSVDNSGSEVLYVAANTQ 251
Query: 269 --GSLRIWDVNDFKSQK-QVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIK 325
GS+ WD ++ + ++IK S ++ + DGK +A G +G + I +
Sbjct: 252 RGGSIITWDTTSWRRRSSKLIKRNNS------ISAFNVSADGKLLAVGTLEGDVLIIDST 305
Query: 326 PGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKDALKVF 380
+ + ++K+H +T LTFS D R L+S SFD ++ +++ + +V+
Sbjct: 306 K---MQTNQIVKKAHLGLVTALTFSPDSRCLVSVSFDSRARLTVIKQKGEKRRVY 357
>AT5G50550.1 | Symbols: | WD-40 repeat family protein / St12p
protein, putative | chr5:20594096-20595945 FORWARD
Length = 383
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 105/235 (44%), Gaps = 28/235 (11%)
Query: 150 ALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSWSPSADRFLC 209
+L+ + G+ + +G+ D T+R++++ M + L E V++L++S S +FL
Sbjct: 147 SLSFNQDGTVLATGAEDGTLRVFEWPSMKTLLN-----ESKTHASVKSLTFSESG-KFLV 200
Query: 210 ITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKETILTSSED- 268
G+ +++D + I L K + E + ++
Sbjct: 201 SLGAPLCRVWD---------VNASAAIASLSKEKDEMFASCRFSVDNSGSEVLYVAANTQ 251
Query: 269 --GSLRIWDVNDFKSQK-QVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIK 325
GS+ WD ++ + ++IK S ++ + DGK +A G +G + I +
Sbjct: 252 RGGSIITWDTTSWRRRSSKLIKRNNS------ISAFNVSADGKLLAVGTLEGDVLIIDST 305
Query: 326 PGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKDALKVF 380
+ + ++K+H +T LTFS D R L+S SFD ++ +++ + +V+
Sbjct: 306 K---MQTNQIVKKAHLGLVTALTFSPDSRCLVSVSFDSRARLTVIKQKGEKRRVY 357
>AT2G33340.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:14133540-14138076 REVERSE
Length = 565
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 24/228 (10%)
Query: 148 VSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSWSPSADRF 207
+ ++ + HS + +G D T ++D S + L GH + S D
Sbjct: 225 ICSMDILHSKDVIATGGVDATAVLFD-------RPSGQILSTLTGHSKKVTSVKFVGDSD 277
Query: 208 LCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKETILTSSE 267
L +T SA + G + G L + + +T HP K +++S
Sbjct: 278 LVLTASADKTVRIWRNPGDGNYACG----YTLNDHSAEVRAVTV---HPTNKY-FVSASL 329
Query: 268 DGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIKPG 327
DG+ +D++ QV V ++ DG + G ++IW++K
Sbjct: 330 DGTWCFYDLSSGSCLAQVSDDS----KNVDYTAAAFHPDGLILGTGTSQSVVKIWDVK-- 383
Query: 328 WGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKD 375
S+ ++ H ++T ++FS + L + + DG +++WDLRK ++
Sbjct: 384 --SQANVAKFDGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRKLRN 428
>AT2G26060.2 | Symbols: EMB1345 | EMB1345 (EMBRYO DEFECTIVE 1345);
nucleotide binding | chr2:11109478-11112159 FORWARD
Length = 337
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 82/195 (42%), Gaps = 28/195 (14%)
Query: 186 QLEPFEGH--QVRNLSWSPSADR-------FLCITGSAQAKIYDRDGLTLGEFMKG---D 233
+++ EGH +V +++W+P + +G +I+++ L+ K +
Sbjct: 12 EIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEE 71
Query: 234 MYIRDLKNTKGHITGLTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRP 293
+ R +++ W P + + T+S DG+ IW ++ S+ + I
Sbjct: 72 THTRTVRSCA----------WSPSG-QLLATASFDGTTGIW--KNYGSEFECISTLEGHE 118
Query: 294 GRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDE 353
V + +WN G C+A D S+ IW + G + H D+ + +
Sbjct: 119 NEVK--SVSWNASGSCLATCSRDKSVWIWEVLEG-NEYDCAAVLTGHTQDVKMVQWHPTM 175
Query: 354 RILLSRSFDGSLKVW 368
+L S S+D ++KVW
Sbjct: 176 DVLFSCSYDNTIKVW 190
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 17/151 (11%)
Query: 139 IVLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGH--QVR 196
++ + HT+ V + A SG + + S+D T ++ G F + EGH +V+
Sbjct: 68 VLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYG-----SEFECISTLEGHENEVK 122
Query: 197 NLSWSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHP 256
++SW+ S GS A + + E ++G+ Y T GH + +WHP
Sbjct: 123 SVSWNAS--------GSCLATCSRDKSVWIWEVLEGNEYDCAAVLT-GHTQDVKMVQWHP 173
Query: 257 KAKETILTSSEDGSLRIWDVNDFKSQKQVIK 287
+ + + S D ++++W D + Q ++
Sbjct: 174 -TMDVLFSCSYDNTIKVWWSEDDDGEYQCVQ 203
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 228 EFMKGDMYIRDLKNTKGHITGLTWG-EWHPKAKET-----ILTS-SEDGSLRIWDVNDFK 280
+ M+ ++ + +++ +GH T W W+P + IL S S D ++RIW+ +
Sbjct: 2 DLMEKNLELVEIQKLEGH-TDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSL- 59
Query: 281 SQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIKPGWGSRPD-IHIEKS 339
S+ K L V +C W+ G+ +A DG+ IW +GS + I +
Sbjct: 60 SRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIW---KNYGSEFECISTLEG 116
Query: 340 HEDDITGLTFSSDERILLSRSFDGSLKVWDL 370
HE+++ +++++ L + S D S+ +W++
Sbjct: 117 HENEVKSVSWNASGSCLATCSRDKSVWIWEV 147
>AT2G46280.2 | Symbols: TIF3I1, TRIP-1 | TRIP-1 (TGF-BETA RECEPTOR
INTERACTING PROTEIN 1); nucleotide binding |
chr2:19010729-19012466 REVERSE
Length = 328
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 21/237 (8%)
Query: 139 IVLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNL 198
I++KGH + ++ L + G + S + D+T ++ F RL ++R GH
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLW-FADNGERLGTYR------GHNGAVW 56
Query: 199 SWSPSADRFLCITGSAQ--AKIYD-RDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWH 255
S D ITGSA AK++D + G L F K + R + G + +
Sbjct: 57 CCDVSRDSSRLITGSADQTAKLWDVKSGKELFTF-KFNAPTRSVDFAVGDRLAVITTDHF 115
Query: 256 PKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRP-GRVPVNTCTWNHDGKCIAGGI 314
I RI + + + + V+ L P G+ +N W + I G
Sbjct: 116 VDRTAAIHVK------RIAEDPEEQDAESVLV--LHCPDGKKRINRAVWGPLNQTIVSGG 167
Query: 315 GDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLR 371
D I+IW+ + G + E H+ DIT L ++D+ L+ S D + K+WD+R
Sbjct: 168 EDKVIRIWDAETGKLLKQSDE-EVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMR 223
>AT2G46280.1 | Symbols: TIF3I1, TRIP-1 | TRIP-1 (TGF-BETA RECEPTOR
INTERACTING PROTEIN 1); nucleotide binding / protein
binding | chr2:19010729-19012466 REVERSE
Length = 328
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 21/237 (8%)
Query: 139 IVLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNL 198
I++KGH + ++ L + G + S + D+T ++ F RL ++R GH
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLW-FADNGERLGTYR------GHNGAVW 56
Query: 199 SWSPSADRFLCITGSAQ--AKIYD-RDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWH 255
S D ITGSA AK++D + G L F K + R + G + +
Sbjct: 57 CCDVSRDSSRLITGSADQTAKLWDVKSGKELFTF-KFNAPTRSVDFAVGDRLAVITTDHF 115
Query: 256 PKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRP-GRVPVNTCTWNHDGKCIAGGI 314
I RI + + + + V+ L P G+ +N W + I G
Sbjct: 116 VDRTAAIHVK------RIAEDPEEQDAESVLV--LHCPDGKKRINRAVWGPLNQTIVSGG 167
Query: 315 GDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLR 371
D I+IW+ + G + E H+ DIT L ++D+ L+ S D + K+WD+R
Sbjct: 168 EDKVIRIWDAETGKLLKQSDE-EVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMR 223
>AT4G34460.4 | Symbols: ELK4, AGB1 | AGB1 (GTP BINDING PROTEIN BETA
1) | chr4:16477397-16479270 REVERSE
Length = 372
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 113/276 (40%), Gaps = 36/276 (13%)
Query: 141 LKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSW 200
L+GHT V +L +R++S S D R+ + + S+ +L V ++
Sbjct: 56 LQGHTGKVYSLDWTPERNRIVSASQDG--RLIVWNALTSQKTHAIKLPC---AWVMTCAF 110
Query: 201 SPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKE 260
SP+ C + I+ +L D + + GH ++ ++ P
Sbjct: 111 SPNGQSVACGGLDSVCSIF-----SLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDA 165
Query: 261 TILTSSEDGSLRIWDVN----------DFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCI 310
++TSS D + +WDV +F+S +S G P W G C
Sbjct: 166 HLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNP----NWFISGSC- 220
Query: 311 AGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDL 370
D + ++W+ + SR + HE D+ + F D + S DG+ +++D+
Sbjct: 221 -----DSTARLWDTRAA--SRA-VRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDI 272
Query: 371 RKTKDALKVFEDLPN--NYAQTNIAFSPDEQLFFTG 404
R T L+V++ + N T+IAFS +L F G
Sbjct: 273 R-TGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAG 307
>AT4G34460.3 | Symbols: ELK4, AGB1 | AGB1 (GTP BINDING PROTEIN BETA
1); nucleotide binding | chr4:16477590-16479270 REVERSE
Length = 347
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 113/276 (40%), Gaps = 36/276 (13%)
Query: 141 LKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSW 200
L+GHT V +L +R++S S D R+ + + S+ +L V ++
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQD--GRLIVWNALTSQKTHAIKLPC---AWVMTCAF 115
Query: 201 SPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKE 260
SP+ C + I+ +L D + + GH ++ ++ P
Sbjct: 116 SPNGQSVACGGLDSVCSIF-----SLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDA 170
Query: 261 TILTSSEDGSLRIWDVN----------DFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCI 310
++TSS D + +WDV +F+S +S G P W G C
Sbjct: 171 HLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNP----NWFISGSC- 225
Query: 311 AGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDL 370
D + ++W+ + SR + HE D+ + F D + S DG+ +++D+
Sbjct: 226 -----DSTARLWDTRAA--SRA-VRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDI 277
Query: 371 RKTKDALKVFEDLPN--NYAQTNIAFSPDEQLFFTG 404
R T L+V++ + N T+IAFS +L F G
Sbjct: 278 R-TGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAG 312
>AT1G18080.1 | Symbols: ATARCA | ATARCA (Arabidopsis thaliana
Homolog of the Tobacco ArcA); nucleotide binding |
chr1:6222318-6223894 FORWARD
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 35/246 (14%)
Query: 141 LKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDF-QGMNSRLQSFRQLEPFEGHQVRNLS 199
L GH+ V + + G LSGS+D +R++D G+++R F GH LS
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTR--------RFVGHTKDVLS 110
Query: 200 WSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAK 259
+ S D ++ S I + TLGE Y + +GH ++ + P
Sbjct: 111 VAFSLDNRQIVSASRDRTIKLWN--TLGEC----KYTIS-EGGEGHRDWVSCVRFSPNTL 163
Query: 260 E-TILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVP-VNTCTWNHDGKCIAGGIGDG 317
+ TI+++S D ++++W++++ K + + G V+T + DG A G DG
Sbjct: 164 QPTIVSASWDKTVKVWNLSNCKLRSTL-------AGHTGYVSTVAVSPDGSLCASGGKDG 216
Query: 318 SIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKDAL 377
+ +W++ G + +E + I L FS + R L + + +K+WDL ++
Sbjct: 217 VVLLWDLAEG---KKLYSLEANSV--IHALCFSPN-RYWLCAATEHGIKIWDL----ESK 266
Query: 378 KVFEDL 383
+ EDL
Sbjct: 267 SIVEDL 272
>AT5G56190.1 | Symbols: | WD-40 repeat family protein |
chr5:22759789-22762135 FORWARD
Length = 441
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 85/209 (40%), Gaps = 35/209 (16%)
Query: 161 LSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSWSPSADRFLCITGSAQAKIYD 220
++ + D VR +D + +Q FR L P V + S SP + + + G D
Sbjct: 246 MASNNDCGVRDFDMERYK-LVQLFRYLWP-----VNHSSLSPDG-KLVAVVGD------D 292
Query: 221 RDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKETILTSSEDGSLRIWDVNDFK 280
DGL L + G + + KGH+ WHP T T ++D + RIWD
Sbjct: 293 PDGL-LVDTSNG----QTIGTLKGHLDYSFASAWHPNGV-TFATGNQDKTCRIWDTRKLS 346
Query: 281 SQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSH 340
V+K L V + + DG+ +A + I++ K G+ +I
Sbjct: 347 ESVAVLKGNLG-----AVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFFG-- 399
Query: 341 EDDITGLTFSSDERILLSRSFDGSLKVWD 369
+I+G++FS D L + VWD
Sbjct: 400 --EISGISFSPDTESLF-------IGVWD 419
>AT4G34460.1 | Symbols: ELK4, AGB1 | AGB1 (GTP BINDING PROTEIN BETA
1); nucleotide binding | chr4:16477397-16479270 REVERSE
Length = 377
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 113/276 (40%), Gaps = 36/276 (13%)
Query: 141 LKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSW 200
L+GHT V +L +R++S S D R+ + + S+ +L V ++
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDG--RLIVWNALTSQKTHAIKLPC---AWVMTCAF 115
Query: 201 SPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKE 260
SP+ C + I+ +L D + + GH ++ ++ P
Sbjct: 116 SPNGQSVACGGLDSVCSIF-----SLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDA 170
Query: 261 TILTSSEDGSLRIWDVN----------DFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCI 310
++TSS D + +WDV +F+S +S G P W G C
Sbjct: 171 HLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNP----NWFISGSC- 225
Query: 311 AGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDL 370
D + ++W+ + SR + HE D+ + F D + S DG+ +++D+
Sbjct: 226 -----DSTARLWDTRAA--SRA-VRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDI 277
Query: 371 RKTKDALKVFEDLPN--NYAQTNIAFSPDEQLFFTG 404
R T L+V++ + N T+IAFS +L F G
Sbjct: 278 R-TGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAG 312
>AT1G11160.1 | Symbols: | nucleotide binding | chr1:3733406-3739363
FORWARD
Length = 1021
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 244 GHITGLTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRV-PVNTCT 302
G++ L+ G+ K +LT +D + +W + S +S G PV++
Sbjct: 16 GNVNCLSIGK---KTSRLLLTGGDDYKVNLWSIGKTTS-------PMSLCGHTSPVDSVA 65
Query: 303 WNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFD 362
+N + + G G I++W+++ R H + + + F L S S D
Sbjct: 66 FNSEEVLVLAGASSGVIKLWDLEESKMVRAFT----GHRSNCSAVEFHPFGEFLASGSSD 121
Query: 363 GSLKVWDLRKTKDALKVFEDLPNNYAQTNIAFSPDEQLFFTG 404
+L+VWD RK K ++ ++ + + I FSPD + +G
Sbjct: 122 TNLRVWDTRK-KGCIQTYKG--HTRGISTIEFSPDGRWVVSG 160
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 93/217 (42%), Gaps = 28/217 (12%)
Query: 262 ILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQI 321
+L + G +++WD+ + K + R + ++ G+ +A G D ++++
Sbjct: 73 VLAGASSGVIKLWDLEESKMVRAFTG------HRSNCSAVEFHPFGEFLASGSSDTNLRV 126
Query: 322 WNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKDALKVFE 381
W+ + + I K H I+ + FS D R ++S D +KVWDL A K+
Sbjct: 127 WDTR----KKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDL----TAGKLLH 178
Query: 382 DLPNNYAQT-NIAFSPDEQLFFTGTSVERESTTGGLLCFFDRLNLDLVSRVGIAPTSSVI 440
+ + ++ F P E L TG S +R + F+D +L+ P ++ +
Sbjct: 179 EFKCHEGPIRSLDFHPLEFLLATG-SADRT------VKFWDLETFELIGTT--RPEATGV 229
Query: 441 RC-SWHPKLNQIFATVGDKSQGGTHILYDPTISEKGA 476
R ++HP +F + D G ++P I G
Sbjct: 230 RAIAFHPDGQTLFCGLDD---GLKVYSWEPVICRDGV 263
>AT5G56190.2 | Symbols: | WD-40 repeat family protein |
chr5:22759880-22762135 FORWARD
Length = 447
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 85/209 (40%), Gaps = 35/209 (16%)
Query: 161 LSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSWSPSADRFLCITGSAQAKIYD 220
++ + D VR +D + +Q FR L P V + S SP + + + G D
Sbjct: 252 MASNNDCGVRDFDMERYK-LVQLFRYLWP-----VNHSSLSPDG-KLVAVVGD------D 298
Query: 221 RDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKETILTSSEDGSLRIWDVNDFK 280
DGL L + G + + KGH+ WHP T T ++D + RIWD
Sbjct: 299 PDGL-LVDTSNG----QTIGTLKGHLDYSFASAWHPNGV-TFATGNQDKTCRIWDTRKLS 352
Query: 281 SQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSH 340
V+K L V + + DG+ +A + I++ K G+ +I
Sbjct: 353 ESVAVLKGNLG-----AVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFFG-- 405
Query: 341 EDDITGLTFSSDERILLSRSFDGSLKVWD 369
+I+G++FS D L + VWD
Sbjct: 406 --EISGISFSPDTESLF-------IGVWD 425
>AT2G46280.3 | Symbols: TIF3I1, TRIP-1 | TRIP-1 (TGF-BETA RECEPTOR
INTERACTING PROTEIN 1); nucleotide binding |
chr2:19011252-19012466 REVERSE
Length = 254
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 21/237 (8%)
Query: 139 IVLKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNL 198
I++KGH + ++ L + G + S + D+T ++ F RL ++R GH
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLW-FADNGERLGTYR------GHNGAVW 56
Query: 199 SWSPSADRFLCITGSAQ--AKIYD-RDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWH 255
S D ITGSA AK++D + G L F K + R + G + +
Sbjct: 57 CCDVSRDSSRLITGSADQTAKLWDVKSGKELFTF-KFNAPTRSVDFAVGDRLAVITTDHF 115
Query: 256 PKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRP-GRVPVNTCTWNHDGKCIAGGI 314
I RI + + + + V+ L P G+ +N W + I G
Sbjct: 116 VDRTAAIHVK------RIAEDPEEQDAESVLV--LHCPDGKKRINRAVWGPLNQTIVSGG 167
Query: 315 GDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLR 371
D I+IW+ + G + E H+ DIT L ++D+ L+ S D + K+WD+R
Sbjct: 168 EDKVIRIWDAETGKLLKQSDE-EVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMR 223
>AT2G21390.1 | Symbols: | coatomer protein complex, subunit alpha,
putative | chr2:9159508-9163657 FORWARD
Length = 1218
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 298 VNTCTWNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILL 357
+ T ++H+ I D +I+IWN W SR I + H + +F E +++
Sbjct: 96 IRTVQFHHENPWIVSASDDQTIRIWN----WQSRTCISVLTGHNHYVMCASFHPKEDLVV 151
Query: 358 SRSFDGSLKVWDLRKTK 374
S S D +++VWD+ K
Sbjct: 152 SASLDQTVRVWDIGALK 168
>AT1G27840.2 | Symbols: ATCSA-1 | ATCSA-1; nucleotide binding |
chr1:9693319-9696244 REVERSE
Length = 393
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 18/139 (12%)
Query: 262 ILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRV---PVNTCTWNHDGKCIAGGIGDGS 318
+L+ + DGS ++DV + V+ K+ PG+V +++ +H IA G D
Sbjct: 59 LLSGAADGSAAVFDVQRATDYEAVVDFKM--PGKVYRTAMSSMAMSH--TLIAAGTEDVQ 114
Query: 319 IQIWNIKPGWGSRPDIHIEKSHEDDITGLTFS-SDERILLSRSFDGSLKVWDLRKTKDAL 377
+++ +I G S H H D + + +S S E +L + DG+++ WD+R+
Sbjct: 115 VRLCDIASGAFS----HTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRA-GCF 169
Query: 378 KVFEDLPNNYAQTNIAFSP 396
+V + +QT + F P
Sbjct: 170 RVLDQ-----SQTQLGFRP 183
>AT1G15750.4 | Symbols: WSIP1, TPL | TPL/WSIP1 (WUS-INTERACTING
PROTEIN 1) | chr1:5415081-5420354 REVERSE
Length = 1131
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 20/152 (13%)
Query: 260 ETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNH--DGKCIAGGIGDG 317
++ + S+ G + ++++ FK+ + P P T H D IA G+ D
Sbjct: 847 DSYVMSASGGKISLFNMMTFKTMATFMPPP-------PAATFLAFHPQDNNIIAIGMDDS 899
Query: 318 SIQIWNIKPGWGSRPDIHIE-KSHEDDITGLTFSSDERILLSRSFDGSLKVWDL----RK 372
+IQI+N++ ++ + K H ITGL FS+ +L+S D L VW+ ++
Sbjct: 900 TIQIYNVRVD-----EVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQ 954
Query: 373 TKDALKVFEDLPNNY-AQTNIAFSPDEQLFFT 403
L + + PN+ + T + F D+ F
Sbjct: 955 RSKVLPLPQGRPNSAPSDTRVQFHQDQAHFLV 986
>AT1G15750.3 | Symbols: WSIP1, TPL | TPL/WSIP1 (WUS-INTERACTING
PROTEIN 1) | chr1:5415081-5420354 REVERSE
Length = 1131
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 20/152 (13%)
Query: 260 ETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNH--DGKCIAGGIGDG 317
++ + S+ G + ++++ FK+ + P P T H D IA G+ D
Sbjct: 847 DSYVMSASGGKISLFNMMTFKTMATFMPPP-------PAATFLAFHPQDNNIIAIGMDDS 899
Query: 318 SIQIWNIKPGWGSRPDIHIE-KSHEDDITGLTFSSDERILLSRSFDGSLKVWDL----RK 372
+IQI+N++ ++ + K H ITGL FS+ +L+S D L VW+ ++
Sbjct: 900 TIQIYNVRVD-----EVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQ 954
Query: 373 TKDALKVFEDLPNNY-AQTNIAFSPDEQLFFT 403
L + + PN+ + T + F D+ F
Sbjct: 955 RSKVLPLPQGRPNSAPSDTRVQFHQDQAHFLV 986
>AT1G15750.2 | Symbols: WSIP1, TPL | TPL/WSIP1 (WUS-INTERACTING
PROTEIN 1) | chr1:5415081-5420354 REVERSE
Length = 1131
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 20/152 (13%)
Query: 260 ETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNH--DGKCIAGGIGDG 317
++ + S+ G + ++++ FK+ + P P T H D IA G+ D
Sbjct: 847 DSYVMSASGGKISLFNMMTFKTMATFMPPP-------PAATFLAFHPQDNNIIAIGMDDS 899
Query: 318 SIQIWNIKPGWGSRPDIHIE-KSHEDDITGLTFSSDERILLSRSFDGSLKVWDL----RK 372
+IQI+N++ ++ + K H ITGL FS+ +L+S D L VW+ ++
Sbjct: 900 TIQIYNVRVD-----EVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQ 954
Query: 373 TKDALKVFEDLPNNY-AQTNIAFSPDEQLFFT 403
L + + PN+ + T + F D+ F
Sbjct: 955 RSKVLPLPQGRPNSAPSDTRVQFHQDQAHFLV 986
>AT1G15750.1 | Symbols: WSIP1, TPL | TPL/WSIP1 (WUS-INTERACTING
PROTEIN 1); protein binding | chr1:5415081-5420354
REVERSE
Length = 1131
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 20/152 (13%)
Query: 260 ETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNH--DGKCIAGGIGDG 317
++ + S+ G + ++++ FK+ + P P T H D IA G+ D
Sbjct: 847 DSYVMSASGGKISLFNMMTFKTMATFMPPP-------PAATFLAFHPQDNNIIAIGMDDS 899
Query: 318 SIQIWNIKPGWGSRPDIHIE-KSHEDDITGLTFSSDERILLSRSFDGSLKVWDL----RK 372
+IQI+N++ ++ + K H ITGL FS+ +L+S D L VW+ ++
Sbjct: 900 TIQIYNVRVD-----EVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQ 954
Query: 373 TKDALKVFEDLPNNY-AQTNIAFSPDEQLFFT 403
L + + PN+ + T + F D+ F
Sbjct: 955 RSKVLPLPQGRPNSAPSDTRVQFHQDQAHFLV 986
>AT3G13340.1 | Symbols: | WD-40 repeat family protein |
chr3:4332377-4334610 FORWARD
Length = 447
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 17/133 (12%)
Query: 237 RDLKNTKGHITGLTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRV 296
+ L+ GH+ WHP T T ++D + R+WD+ + V+K L
Sbjct: 310 KTLETLSGHLDFSFASAWHPDGV-TFSTGNQDKTCRVWDIRNLSQSVTVLKGNLG----- 363
Query: 297 PVNTCTWNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERIL 356
+ + + DGK +A + ++++ G+ + +I +I+G++FS D L
Sbjct: 364 AIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDFFG----EISGISFSPDTEAL 419
Query: 357 LSRSFDGSLKVWD 369
+ VWD
Sbjct: 420 F-------IGVWD 425
>AT1G15470.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:5315833-5317691 FORWARD
Length = 333
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 27/186 (14%)
Query: 141 LKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSW 200
+GH V + ++D + R S S D+T ++++ L SF H VR ++
Sbjct: 52 FEGHKGAVWSCSLDKNAIRAASASADFTAKIWNAL-TGDELHSFEH-----KHIVRACAF 105
Query: 201 SPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKE 260
S R L TG + KI L + + + D +++ N+ G I + W +
Sbjct: 106 SEDTHRLL--TGGME-KI-----LRIFDLNRPDAPPKEVGNSPGSIRTVEW----LHSDN 153
Query: 261 TILTSSED-GSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSI 319
TIL+S D G +R+WD+ +S K V + + PV + + DG+ I G S+
Sbjct: 154 TILSSCTDTGDIRLWDI---RSDKIVHTLET----KSPVTSAEVSQDGRYITTADGS-SV 205
Query: 320 QIWNIK 325
+ W+ K
Sbjct: 206 KFWDAK 211
>AT3G18060.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:6183886-6186794 FORWARD
Length = 609
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 109/251 (43%), Gaps = 43/251 (17%)
Query: 136 SNEIVLKGHTKVVSALAVDHSGS-RVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQ 194
SN GH++ V + A+ + R+++ D+ V Y+ +L S R+ F
Sbjct: 135 SNVGEFDGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEGPPFKFKLSS-REHSNF---- 189
Query: 195 VRNLSWSPSADRFLCITGSAQAKIYD-RDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGE 253
V + ++P +F+ ++ + IYD + LGE D + KG I ++W
Sbjct: 190 VNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGH-------KGSIYAVSW-- 240
Query: 254 WHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVP-----VNTCTWNHDGK 308
P K+ +LT S D S +IWD++D S + L+ PG + C W +D
Sbjct: 241 -SPDGKQ-VLTVSADKSAKIWDISDNGSGS--LNTTLNCPGSSGGVDDMLVGCLWQND-H 295
Query: 309 CIAGGIGDGSIQIWNIKPGWGSRPDIHIEKS------HEDDITGL-TFSSDERILLSRSF 361
+ +G G+I I++ ++KS H +++ L + +LS S+
Sbjct: 296 IVTVSLG-GTISIFSAS---------DLDKSPFQFSGHMKNVSSLAVLKGNADYILSGSY 345
Query: 362 DGSLKVWDLRK 372
DG + W L +
Sbjct: 346 DGLICKWMLGR 356
>AT1G04510.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:1226748-1230591 FORWARD
Length = 523
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 113/270 (41%), Gaps = 33/270 (12%)
Query: 148 VSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSWSPSADRF 207
+ ++ + HS + +G D T ++D S + L GH + S D
Sbjct: 225 IFSMDILHSKDVIATGGIDTTAVLFD-------RPSGQILSTLTGHSKKVTSIKFVGDTD 277
Query: 208 LCITGSAQAKIYDRDGLTLGEFMKGDMYIRD-LKNTKGHITGLTWGEWHPKAKETILTSS 266
L +T S+ D+ G G+ R LK+ + +T H K +++S
Sbjct: 278 LVLTASS-----DKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTV---HATNK-YFVSAS 328
Query: 267 EDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIKP 326
D + +D++ QV + V ++ DG + G ++IW++K
Sbjct: 329 LDSTWCFYDLSSGLCLAQVTD---ASENDVNYTAAAFHPDGLILGTGTAQSIVKIWDVK- 384
Query: 327 GWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKDALKVFEDLPN- 385
S+ ++ H +IT ++FS + L + + DG +++WDLRK K+ + F D P+
Sbjct: 385 ---SQANVAKFGGHNGEITSISFSENGYFLATAALDG-VRLWDLRKLKN-FRTF-DFPDA 438
Query: 386 -----NYAQTNIAFSPDEQLFFTGTSVERE 410
+++ + + + + F SV+ E
Sbjct: 439 NSVEFDHSGSYLGIAASDIRVFQAASVKAE 468
>AT1G04510.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:1226748-1230591 FORWARD
Length = 523
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 113/270 (41%), Gaps = 33/270 (12%)
Query: 148 VSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSWSPSADRF 207
+ ++ + HS + +G D T ++D S + L GH + S D
Sbjct: 225 IFSMDILHSKDVIATGGIDTTAVLFD-------RPSGQILSTLTGHSKKVTSIKFVGDTD 277
Query: 208 LCITGSAQAKIYDRDGLTLGEFMKGDMYIRD-LKNTKGHITGLTWGEWHPKAKETILTSS 266
L +T S+ D+ G G+ R LK+ + +T H K +++S
Sbjct: 278 LVLTASS-----DKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTV---HATNK-YFVSAS 328
Query: 267 EDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIKP 326
D + +D++ QV + V ++ DG + G ++IW++K
Sbjct: 329 LDSTWCFYDLSSGLCLAQVTD---ASENDVNYTAAAFHPDGLILGTGTAQSIVKIWDVK- 384
Query: 327 GWGSRPDIHIEKSHEDDITGLTFSSDERILLSRSFDGSLKVWDLRKTKDALKVFEDLPN- 385
S+ ++ H +IT ++FS + L + + DG +++WDLRK K+ + F D P+
Sbjct: 385 ---SQANVAKFGGHNGEITSISFSENGYFLATAALDG-VRLWDLRKLKN-FRTF-DFPDA 438
Query: 386 -----NYAQTNIAFSPDEQLFFTGTSVERE 410
+++ + + + + F SV+ E
Sbjct: 439 NSVEFDHSGSYLGIAASDIRVFQAASVKAE 468
>AT2G26490.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:11275113-11276510 FORWARD
Length = 465
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 85/214 (39%), Gaps = 56/214 (26%)
Query: 225 TLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKETILTSSEDGSLRIW----DVNDFK 280
T+ E + + I L +GHI L K+ + T S+ ++R+W + + FK
Sbjct: 78 TVEENLPQNGLIGSLVREEGHIYSL------AATKDLLYTGSDSKNIRVWKNLKEFSAFK 131
Query: 281 SQKQVIKPKLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIKPGWGS---------- 330
++K + G+ I G DG I++W + P S
Sbjct: 132 CNSGLVKAIVI--------------SGEKIFTGHQDGKIRVWKVSPKNQSLHKRSGTLPT 177
Query: 331 ---------RPDIHIEK---------SHEDDITGLTFSSDERILLSRSFDGSLKVWDLRK 372
+P ++E H D ++ L+ + ++ +L S S+D ++KVW +
Sbjct: 178 LKDIFKASLKPRNYVEVKKHRTALWIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIAD 237
Query: 373 TKDALKVFEDLPNNYAQTNIAFSPDEQLFFTGTS 406
+ K E +P + N S E + F+G++
Sbjct: 238 S----KCLESIPAHDDAVNSVVSTTEAIVFSGSA 267
>AT3G63460.2 | Symbols: | WD-40 repeat family protein |
chr3:23441984-23448216 REVERSE
Length = 1102
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 14/123 (11%)
Query: 263 LTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGK--------CIAGGI 314
L+ S +L I+ + DF+S + + P N W +G IAGG+
Sbjct: 33 LSFSSSANLEIFKL-DFQSDDRDLPLVGEIPSSERFNRLAWGRNGSGSEEFALGLIAGGL 91
Query: 315 GDGSIQIWNIKPGWGSRPD----IHIEKSHEDDITGLTFSS-DERILLSRSFDGSLKVWD 369
DG+I +WN GS+P + H+ + GL F++ +L S + DG + +WD
Sbjct: 92 VDGNIDLWNPLSLIGSQPSENALVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWD 151
Query: 370 LRK 372
L K
Sbjct: 152 LLK 154
>AT3G63460.1 | Symbols: | WD-40 repeat family protein |
chr3:23441984-23448216 REVERSE
Length = 1104
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 14/123 (11%)
Query: 263 LTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTWNHDGK--------CIAGGI 314
L+ S +L I+ + DF+S + + P N W +G IAGG+
Sbjct: 33 LSFSSSANLEIFKL-DFQSDDRDLPLVGEIPSSERFNRLAWGRNGSGSEEFALGLIAGGL 91
Query: 315 GDGSIQIWNIKPGWGSRPD----IHIEKSHEDDITGLTFSS-DERILLSRSFDGSLKVWD 369
DG+I +WN GS+P + H+ + GL F++ +L S + DG + +WD
Sbjct: 92 VDGNIDLWNPLSLIGSQPSENALVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWD 151
Query: 370 LRK 372
L K
Sbjct: 152 LLK 154
>AT5G56130.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:22739981-22742291 REVERSE
Length = 315
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 298 VNTCTWNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILL 357
V++ WN +G +A G D + +IWNI+P S+ K H D + L + L+
Sbjct: 23 VHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLV 82
Query: 358 SR-SFDGSLKVWDLRKTKDALKVFEDLPNNYAQTNIAFSPD 397
+ S D S+++WD R K +V N NI + PD
Sbjct: 83 ATASGDKSVRLWDARSGKCTQQVELSGEN----INITYKPD 119
>AT4G35050.1 | Symbols: NFC3, MSI3 | MSI3 (NUCLEOSOME/CHROMATIN
ASSEMBLY FACTOR GROUP C 3); protein binding |
chr4:16682757-16684756 REVERSE
Length = 424
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 248 GLTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPG-RVPVNTCTWNHD 306
GL W + + +L+ S+D + +WDV+ + K V+ P G + + W+
Sbjct: 174 GLAWSSF---KEGYLLSGSQDQRICLWDVSATATDK-VLNPMHVYEGHQSIIEDVAWHMK 229
Query: 307 GKCIAGGIGDGS-IQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSS-DERILLSRSFDGS 364
+ I G GD + IW+++ + H K HE +I L+F+ +E +L + S D +
Sbjct: 230 NENIFGSAGDDCQLVIWDLR----TNQMQHQVKVHEREINYLSFNPFNEWVLATASSDST 285
Query: 365 LKVWDLRKTKDALKVF 380
+ ++DLRK L V
Sbjct: 286 VALFDLRKLTAPLHVL 301
>AT1G76260.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:28615257-28617892 FORWARD
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 244 GHITGLTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVNTCTW 303
H+ + W P L S ++ +L W ++ K +V+ K S R ++ W
Sbjct: 118 AHVGKINCVLWCPSGNSDKLISMDEQNLVFWSLDSSKKSAEVLS-KESAGMRHSLSGGAW 176
Query: 304 N-HDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFS-SDERILLSRSF 361
N HD +A + SIQ W+++ + + IE++H + + ++ E IL+S
Sbjct: 177 NPHDVNSVAA-TSESSIQFWDLRT---MKKNNSIERAH---VRNVDYNLKREHILVSADD 229
Query: 362 DGSLKVWDLRKTK 374
+ + +WDLRKTK
Sbjct: 230 ESGIHLWDLRKTK 242
>AT2G01330.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:158416-160183 REVERSE
Length = 474
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 26/215 (12%)
Query: 159 RVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSWSPSADRFLCITGSAQAKI 218
R+ + D+ V YD S R+ F V + +SP +F+ ++ + I
Sbjct: 23 RIATCGEDFLVNFYDGPPFKFH-SSHREHSNF----VNCIRYSPDGTKFITVSSDKKGMI 77
Query: 219 YD-RDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPKAKETILTSSEDGSLRIWDVN 277
YD + G +GE D + KG I ++W P +K +LT S D S ++W+V
Sbjct: 78 YDGKTGDKVGELASEDGH-------KGSIYAVSWS---PDSKR-VLTVSADKSAKVWEVA 126
Query: 278 DFKSQKQVIKP---KLSRPGRVPVNTCTWNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDI 334
+ + VIK S + C W +D I +G G++ +++ +P +
Sbjct: 127 EDGTIGSVIKTLSFMESGGAEDMLVGCLWQND-HLITVSLG-GTMSLFSADD--MDKPPL 182
Query: 335 HIEKSHEDDITGL-TFSSDERILLSRSFDGSLKVW 368
+ H ++T L +++ +LS S+DG + W
Sbjct: 183 -LLSGHIKNVTSLAVLGENQKTILSCSYDGLIVKW 216
>AT5G49430.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:20054564-20062680 REVERSE
Length = 1677
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 89/234 (38%), Gaps = 42/234 (17%)
Query: 141 LKGHTKVVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSW 200
L+GH V +D SG V++GS D V+++ + + L GH+
Sbjct: 241 LRGHRNAVYCAILDRSGRYVITGSDDRLVKVWS-------MDTAYCLASCRGHEGDITDL 293
Query: 201 SPSADRFLCITGSAQAKIYD---RDGLTLGEFMKGDMYIRDLKNTKGHITGLTWGEWHPK 257
+ S++ + S I DGL + L+ G +T + + P
Sbjct: 294 AVSSNNIFIASASNDCVIRVWRLPDGLP----------VSVLRGHTGAVTAIAFSP-RPG 342
Query: 258 AKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRP-----GRVPVN--------TCTWN 304
+ +L+SS+DG+ RIWD + ++ P+ P G N C +N
Sbjct: 343 SPYQLLSSSDDGTCRIWDARGAQFAPRIYVPRPPSPDGKNSGPSSSNAQQSHQIFCCAFN 402
Query: 305 HDGKCIAGGIGDGSIQIWNIKPGWGSRPD--------IHIEKSHEDDITGLTFS 350
G G D +++++ + D + + HE+D+ + FS
Sbjct: 403 ASGSVFVTGSSDTLARVYSVWSANKTNTDDPEQPNHEMDVLAGHENDVNYVQFS 456
>AT1G62020.1 | Symbols: | coatomer protein complex, subunit alpha,
putative | chr1:22923479-22927393 FORWARD
Length = 1216
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 298 VNTCTWNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILL 357
+ T ++H+ I D +I+IWN W SR + + H + +F E +++
Sbjct: 96 IRTVQFHHEYPWIVSASDDQTIRIWN----WQSRTCVSVLTGHNHYVMCASFHPKEDLVV 151
Query: 358 SRSFDGSLKVWDL 370
S S D +++VWD+
Sbjct: 152 SASLDQTVRVWDI 164
>AT2G25420.1 | Symbols: | similar to TPR4/WSIP2 (TOPLESS-RELATED 4)
[Arabidopsis thaliana] (TAIR:AT3G15880.2); similar to
TPR4/WSIP2 (TOPLESS-RELATED 4), protein binding
[Arabidopsis thaliana] (TAIR:AT3G15880.1); similar to
hypothetical protein [Vitis vinifera] (GB:CAN64663.1);
similar to unnamed protein product [Vitis vinifera]
(GB:CAO62716.1); contains InterPro domain WD40
repeat-like (InterPro:IPR011046); contains InterPro
domain WD40/YVTN repeat-like (InterPro:IPR015943);
contains InterPro domain WD40 repeat
(InterPro:IPR001680); contains InterPro domain LisH
dimerisation motif (InterPro:IPR006594); contains
InterPro domain CTLH, C-terminal to LisH motif
(InterPro:IPR006595) | chr2:10824096-10827998 FORWARD
Length = 740
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 32/225 (14%)
Query: 190 FEGHQVRNLSWSPSADRFLCITGSAQAKIYDRDGLTLGEFMKGDMYIR----------DL 239
F ++ L++SPS D L + A K++ + EF K ++Y + +
Sbjct: 387 FSEEKIARLTYSPSGDYILALAEDATHKLWTWSS-SQNEFCKENVYPKPRLHQPQSGKTM 445
Query: 240 KNTKGHITGLTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLSRPGRVPVN 299
+N T + K + L S+ G + ++D+ +F+ P P+
Sbjct: 446 ENEMA--TSVQKSTSCFAVKGSYLFSTSGGKIAVFDLKNFEKVASFGSP-------TPMA 496
Query: 300 TCTWNHDGKCIAGGIGDGSIQIWNIKPGWGSRPDIHIEKSHEDDITGLTFSSDERILLSR 359
T G +A G+ DGSI I + SR + H+ IT L FS +L+S
Sbjct: 497 TYFIFIPGDLLAVGLDDGSIFIHCL----SSRKVKEKLEGHDQKITCLAFSRCFNVLVSS 552
Query: 360 SFDGSLKVWDLRK-----TKDALKVF---EDLPNNYAQTNIAFSP 396
DG L +W + +K++ + F +L + T+I F P
Sbjct: 553 DSDGKLCLWSTKSWVKLTSKNSTRKFCNRSNLESTSLVTHIQFDP 597