Miyakogusa Predicted Gene
- chr1.CM0206.120.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr1.CM0206.120.nd + phase: 0 /pseudo
(214 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g41680.1 189 2e-48
Glyma03g39120.2 188 4e-48
Glyma03g39120.1 187 1e-47
Glyma03g39120.3 182 3e-46
>Glyma19g41680.1
Length = 202
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 120/193 (62%), Gaps = 18/193 (9%)
Query: 40 AGVDNTFRRKFDXXXXXXXXXXXXXXLKVL----QCRGSPXSIEILKX------------ 83
AGVDNTFRRKFD + + +G P + LK
Sbjct: 9 AGVDNTFRRKFDREEYLERARERERQEEEGRAKPKAKGPPVQRKPLKHRDYEVDLESRLG 68
Query: 84 --TVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLQQVQ 141
VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLQQVQ
Sbjct: 69 KTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLQQVQ 128
Query: 142 DRFEVLKKRKTLGSFTEQDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEEPETDADVA 201
+RFEVLKKRK +GSFTEQDLD AVEEPE D DVA
Sbjct: 129 ERFEVLKKRKDVGSFTEQDLDERILKQQQEEEERKRLRREKKKEKKEKAVEEPEIDPDVA 188
Query: 202 ALMGFGGFRSSNK 214
A+MGFGGFRSSNK
Sbjct: 189 AMMGFGGFRSSNK 201
>Glyma03g39120.2
Length = 201
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 121/195 (62%), Gaps = 18/195 (9%)
Query: 38 QAAGVDNTFRRKFDXXXXXXXXXXXXXXL----------------KVLQCRGSPXSIE-- 79
Q AGVDNTFRRKFD K L+ R +E
Sbjct: 6 QVAGVDNTFRRKFDREEYLERARERERQEEEGRAKPKGKGPPVQRKPLKHRDYEVDLESR 65
Query: 80 ILKXTVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLQQ 139
+ K VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASL+Q
Sbjct: 66 LGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQ 125
Query: 140 VQDRFEVLKKRKTLGSFTEQDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEEPETDAD 199
VQ+RFEVLKKRK +GSFTEQDLD AVEEPE D D
Sbjct: 126 VQERFEVLKKRKDVGSFTEQDLDERILKQQQEEEERKRLRREKKKEKKEKAVEEPEIDPD 185
Query: 200 VAALMGFGGFRSSNK 214
VAA+MGFGGFRSSNK
Sbjct: 186 VAAMMGFGGFRSSNK 200
>Glyma03g39120.1
Length = 202
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 120/193 (62%), Gaps = 18/193 (9%)
Query: 40 AGVDNTFRRKFDXXXXXXXXXXXXXXL----------------KVLQCRGSPXSIE--IL 81
AGVDNTFRRKFD K L+ R +E +
Sbjct: 9 AGVDNTFRRKFDREEYLERARERERQEEEGRAKPKGKGPPVQRKPLKHRDYEVDLESRLG 68
Query: 82 KXTVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLQQVQ 141
K VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASL+QVQ
Sbjct: 69 KTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQ 128
Query: 142 DRFEVLKKRKTLGSFTEQDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEEPETDADVA 201
+RFEVLKKRK +GSFTEQDLD AVEEPE D DVA
Sbjct: 129 ERFEVLKKRKDVGSFTEQDLDERILKQQQEEEERKRLRREKKKEKKEKAVEEPEIDPDVA 188
Query: 202 ALMGFGGFRSSNK 214
A+MGFGGFRSSNK
Sbjct: 189 AMMGFGGFRSSNK 201
>Glyma03g39120.3
Length = 189
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 100/130 (76%)
Query: 85 VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLQQVQDRF 144
VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASL+QVQ+RF
Sbjct: 59 VVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERF 118
Query: 145 EVLKKRKTLGSFTEQDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEEPETDADVAALM 204
EVLKKRK +GSFTEQDLD AVEEPE D DVAA+M
Sbjct: 119 EVLKKRKDVGSFTEQDLDERILKQQQEEEERKRLRREKKKEKKEKAVEEPEIDPDVAAMM 178
Query: 205 GFGGFRSSNK 214
GFGGFRSSNK
Sbjct: 179 GFGGFRSSNK 188