Miyakogusa Predicted Gene
- chr1.CM0178.110.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr1.CM0178.110.nd - phase: 2 /pseudo/partial
(692 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g02090.1 852 0.0
Glyma04g01990.1 847 0.0
Glyma20g03810.1 435 e-122
Glyma10g14550.1 192 1e-48
Glyma19g02930.1 93 1e-18
Glyma12g05360.2 74 4e-13
Glyma12g05360.1 74 4e-13
Glyma11g13340.1 72 2e-12
>Glyma06g02090.1
Length = 792
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/496 (84%), Positives = 440/496 (88%)
Query: 197 VDVVYDGHSEKSTLLLTGYLRARSLCVNQLVHVSGAGDFQLCKIEVLKDPIPLNSRKNQD 256
VD VYDG+SEK TL LTGYLR+R+L VNQLVHVSGAGDFQL KIEVLKDP PLNS+KNQD
Sbjct: 258 VDAVYDGNSEKCTLFLTGYLRSRNLSVNQLVHVSGAGDFQLSKIEVLKDPCPLNSKKNQD 317
Query: 257 LMDSDEMHDVEVTGSLFPDPQNQEALVVENIPDPLAGEQTWPTEAEITKADEDRNQKKIR 316
LMD+DEMHD EV GSL PDPQNQEALVVENIPDPLAGEQTWPTEAEI KADED+ +KKI+
Sbjct: 318 LMDADEMHDTEVIGSLVPDPQNQEALVVENIPDPLAGEQTWPTEAEIAKADEDQKKKKIK 377
Query: 317 KRKLPQGTSEYQAAWIXXXXXXXXXXXXXXXXXXXXXXXXXXFPGQEGNKYSEFDGDGAS 376
KR LP GTSEYQAAWI FPGQE NKYSEFDGDGAS
Sbjct: 378 KRSLPHGTSEYQAAWIVDDSDEESDYDNENDDGMVLDEGEDGFPGQEENKYSEFDGDGAS 437
Query: 377 LRFGDSDEETDNDSVMMEVDILTREKIQDELKEIKEAHAADEEFPDEVDTPLDVPARKRF 436
LR GDSDEETDNDSVMMEVD LTREKI+DEL E+KEAHAADEEFPDEVDTPLDVPARKRF
Sbjct: 438 LRLGDSDEETDNDSVMMEVDNLTREKIEDELNELKEAHAADEEFPDEVDTPLDVPARKRF 497
Query: 437 AKYRGLKSFRTSSWDPKESLPQDYAKIFEFDNFKRTQKHVLAKALEWEQENREDCIPVGS 496
AKYRGLKSFRTSSWDPKESLPQDYA+IFEFDNFKRTQKHVLAKALE + ENREDCI VGS
Sbjct: 498 AKYRGLKSFRTSSWDPKESLPQDYARIFEFDNFKRTQKHVLAKALELDHENREDCISVGS 557
Query: 497 YARLHIKEVPSAVASKLCMLAKTSPVIACGLLKHESKISVLHFSVKKHETYDAPIKSKEE 556
YARLHI VPSAVASKL +LAKT PV ACGLLKHESK+SVLHFSVKKHE YDAPIKSKEE
Sbjct: 558 YARLHIMGVPSAVASKLSLLAKTIPVTACGLLKHESKVSVLHFSVKKHEAYDAPIKSKEE 617
Query: 557 LIFHVGFRQFVGRPTFSSKFINTDKNKMERFLHAGHFSVASIYAPISFPPLPTIILKRDG 616
LIFHVGFRQFVG P FSS+FINTDKNKMERFLHAG FSVASIYAPISFPPLPTIILKRDG
Sbjct: 618 LIFHVGFRQFVGWPIFSSEFINTDKNKMERFLHAGRFSVASIYAPISFPPLPTIILKRDG 677
Query: 617 EDAAPRVAAVGSLKTVDSDRIILKRVILTGYPQRVSKRKASVKYMFYNPEDVKWFKPVEL 676
E+AAP VAAVGSLKTVD+DRIILKRVILTGYPQRVSKRKASV++MFYNPEDVKWFKPVEL
Sbjct: 678 ENAAPAVAAVGSLKTVDADRIILKRVILTGYPQRVSKRKASVRHMFYNPEDVKWFKPVEL 737
Query: 677 YTKRGLRGRIKEPVGT 692
YTKRGLRGRIKEPVGT
Sbjct: 738 YTKRGLRGRIKEPVGT 753
>Glyma04g01990.1
Length = 792
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/497 (85%), Positives = 442/497 (88%), Gaps = 2/497 (0%)
Query: 197 VDVVYDGHSEKSTLLLTGYLRARSLCVNQLVHVSGAGDFQLCKIEVLKDPIPLNSRKNQD 256
VD YDG+SEK TL LTGYLR+R+L VNQLVHVSGAGDFQL KIEVLKDP PLNSRKNQD
Sbjct: 258 VDAEYDGNSEKCTLFLTGYLRSRNLSVNQLVHVSGAGDFQLSKIEVLKDPCPLNSRKNQD 317
Query: 257 LMDSDEMHDVEVTGSLFPDPQNQEALVVENIPDPLAGEQTWPTEAEITKADEDRNQKKIR 316
LMD+DEMHD EV GSL PDPQNQEALVVENIPDPLAGEQTWPTEAEI KADED+ +KKI+
Sbjct: 318 LMDADEMHDAEVIGSLAPDPQNQEALVVENIPDPLAGEQTWPTEAEIAKADEDKKKKKIK 377
Query: 317 KRKLPQGTSEYQAAWIXXXXXXXXXX-XXXXXXXXXXXXXXXXFPGQEGNKYSEFDGDGA 375
KR LP GTSEYQAAWI FPGQE N+YS+FDGDGA
Sbjct: 378 KRSLPHGTSEYQAAWIVDDSDEEESDCDNENDDGMVLDEGEDGFPGQE-NRYSDFDGDGA 436
Query: 376 SLRFGDSDEETDNDSVMMEVDILTREKIQDELKEIKEAHAADEEFPDEVDTPLDVPARKR 435
SLR GDSDEETD DSVMMEVD LTREKI+DELKE+KEAHAADEEFPDEVDTPLDVPARKR
Sbjct: 437 SLRLGDSDEETDIDSVMMEVDNLTREKIEDELKELKEAHAADEEFPDEVDTPLDVPARKR 496
Query: 436 FAKYRGLKSFRTSSWDPKESLPQDYAKIFEFDNFKRTQKHVLAKALEWEQENREDCIPVG 495
FAKYRGLKSFRTSSWDPKESLPQDYA+IFEFDNFKRTQKHVLAKALE +QENREDCIPVG
Sbjct: 497 FAKYRGLKSFRTSSWDPKESLPQDYARIFEFDNFKRTQKHVLAKALELDQENREDCIPVG 556
Query: 496 SYARLHIKEVPSAVASKLCMLAKTSPVIACGLLKHESKISVLHFSVKKHETYDAPIKSKE 555
SYARLHI VPSAVASKL +LAKT PV ACGLLKHESK+SVLHFSVKKHETYDAPIKSKE
Sbjct: 557 SYARLHIMGVPSAVASKLSLLAKTIPVTACGLLKHESKVSVLHFSVKKHETYDAPIKSKE 616
Query: 556 ELIFHVGFRQFVGRPTFSSKFINTDKNKMERFLHAGHFSVASIYAPISFPPLPTIILKRD 615
ELIFHVGFRQFVGRP FSS+FINTDKNKMERFLHAG FSVASIYAPISFPPLPTIILKR
Sbjct: 617 ELIFHVGFRQFVGRPIFSSEFINTDKNKMERFLHAGRFSVASIYAPISFPPLPTIILKRA 676
Query: 616 GEDAAPRVAAVGSLKTVDSDRIILKRVILTGYPQRVSKRKASVKYMFYNPEDVKWFKPVE 675
GEDAAP VAAVGSLKTVD+DRIILKRVILTGYPQRVSKRKASV++MFYNPEDVKWFKPVE
Sbjct: 677 GEDAAPAVAAVGSLKTVDADRIILKRVILTGYPQRVSKRKASVRHMFYNPEDVKWFKPVE 736
Query: 676 LYTKRGLRGRIKEPVGT 692
LYTKRGLRGRIKEPVGT
Sbjct: 737 LYTKRGLRGRIKEPVGT 753
>Glyma20g03810.1
Length = 361
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/287 (76%), Positives = 237/287 (82%), Gaps = 30/287 (10%)
Query: 391 VMMEVDILTREKIQDELKEIKEAHAADEE-----FPDEVDTPLDVPARKRFAKYRGLKSF 445
+ MEVD LTREKI+DEL E+KEAHAA E+ F DEVDTPLDVPARKRFAKYRGLKSF
Sbjct: 77 IFMEVDNLTREKIEDELNELKEAHAAYEDDKIGMFSDEVDTPLDVPARKRFAKYRGLKSF 136
Query: 446 RTSSWDPKESLPQDYAKIFEFDNFKRTQKHVLAKALEWEQENREDCIPVGSYARLHIKEV 505
RTSSWDPK SL E + ENREDCIPVGSYARLHI V
Sbjct: 137 RTSSWDPKVSL-------------------------EVDHENREDCIPVGSYARLHIMGV 171
Query: 506 PSAVASKLCMLAKTSPVIACGLLKHESKISVLHFSVKKHETYDAPIKSKEELIFHVGFRQ 565
PSA+ASKL +LAKT P+ ACGLLKHESK+SVLHFSVKKHE YDAPIKSKEELIFHVGF+Q
Sbjct: 172 PSAIASKLSLLAKTIPITACGLLKHESKVSVLHFSVKKHEAYDAPIKSKEELIFHVGFQQ 231
Query: 566 FVGRPTFSSKFINTDKNKMERFLHAGHFSVASIYAPISFPPLPTIILKRDGEDAAPRVAA 625
FVG P FSS+FINTDKNKMERFLHAG FSVASIYAP+SFPPLP IILKR+GE+A P VAA
Sbjct: 232 FVGWPIFSSEFINTDKNKMERFLHAGRFSVASIYAPVSFPPLPMIILKRNGENATPVVAA 291
Query: 626 VGSLKTVDSDRIILKRVILTGYPQRVSKRKASVKYMFYNPEDVKWFK 672
VGSLKTVD+DRIILKRVILTGYPQRVSKRKASV++MFYNPEDVKWF+
Sbjct: 292 VGSLKTVDADRIILKRVILTGYPQRVSKRKASVRHMFYNPEDVKWFE 338
>Glyma10g14550.1
Length = 134
Score = 192 bits (488), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/134 (73%), Positives = 109/134 (81%), Gaps = 1/134 (0%)
Query: 501 HIKEVPSAVASKLCMLAKTSPVIACGLLKHESKISVLHFSVKKHETYDAPIKSKEELIFH 560
H+ VP+ VASKL +L KT PVIA GLLKHESK+SVLH S T + P + EELIFH
Sbjct: 1 HVMGVPNVVASKLSLLTKTIPVIARGLLKHESKVSVLHCSAVLIITCE-PFQKCEELIFH 59
Query: 561 VGFRQFVGRPTFSSKFINTDKNKMERFLHAGHFSVASIYAPISFPPLPTIILKRDGEDAA 620
VGFRQFVG P FSS+FINTDKNKMERFLH GHFSVASIYAPI FPPLP IILKRDG++AA
Sbjct: 60 VGFRQFVGWPIFSSEFINTDKNKMERFLHVGHFSVASIYAPILFPPLPMIILKRDGDNAA 119
Query: 621 PRVAAVGSLKTVDS 634
P VAAVGSLKT D+
Sbjct: 120 PAVAAVGSLKTFDN 133
>Glyma19g02930.1
Length = 168
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 58/98 (59%)
Query: 301 AEITKADEDRNQKKIRKRKLPQGTSEYQAAWIXXXXXXXXXXXXXXXXXXXXXXXXXXFP 360
AEI K DED+ + KI+KR LP GTSEYQAAWI
Sbjct: 26 AEIAKVDEDQKKSKIKKRSLPHGTSEYQAAWIVDDSDEGSDYDNENDDGMVLDEGEDRSS 85
Query: 361 GQEGNKYSEFDGDGASLRFGDSDEETDNDSVMMEVDIL 398
GQE NKYSEFD D ASL GDSD+ET+NDSVMM +D++
Sbjct: 86 GQEENKYSEFDCDRASLILGDSDKETNNDSVMMVLDMV 123
>Glyma12g05360.2
Length = 1065
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 144/328 (43%), Gaps = 32/328 (9%)
Query: 382 SDEETDNDSVMMEVDILTREKIQDELKEIKEAHAADEEFPDEVDTPLDVPARKRFAKYRG 441
++ E DND V + + L E E E H D F D+ A +R K
Sbjct: 646 ANTEEDNDDVYADFEDL-------ETGEKHENHRTDAAFAATTHKGDDLEAEERRLKKLA 698
Query: 442 LKS-FRTSSWDPKESLPQDYAKIFE-------------FDNFKRT---QKHV-LAKALEW 483
L++ F + D S +D E FD K QK + +A+ +
Sbjct: 699 LRAKFDSQFDDDSGSQEEDTGNENEVKFHRGQANESSYFDKLKEEIELQKQMNIAELNDL 758
Query: 484 EQENREDC--IPVGSYARLHIKEVPSAVASKLCMLAKTSPVIACGLLKHESKISVLHFSV 541
++ R + G+Y RL I++VP + P++ G+ E + + +
Sbjct: 759 DEATRLEIEGFQTGTYLRLEIRDVPCEMVE---YFDPYHPILVGGIGIGEENVGYMQARL 815
Query: 542 KKHETYDAPIKSKEELIFHVGFRQFVGRPTFSSKFINTDKNKMERFLHAGHFSVASIYAP 601
K+H + +K+++ +I VG+R++ P ++ + N +++M ++ +A + P
Sbjct: 816 KRHRWHKKVLKTRDPIIVSVGWRRYQTTPIYAIEDSNG-RHRMLKYTPEHMHCLAMFWGP 874
Query: 602 ISFPPLPTIILKRDGEDAAP-RVAAVGSLKTVDSDRIILKRVILTGYPQRVSKRKASVKY 660
++ P + ++ + A R+ A + + I+K++ L GYP ++ K+ A +K
Sbjct: 875 LAPPNTGVVAIQNLSNNQATFRITATAVVLEFNHAARIVKKIKLVGYPCKIFKKTALIKD 934
Query: 661 MFYNPEDVKWFKPVELYTKRGLRGRIKE 688
MF + +V F+ + T G+RG++K+
Sbjct: 935 MFTSDLEVARFEGAAIRTVSGIRGQVKK 962
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 210 LLLTGYLRARSLCVNQLVHVSGAGDFQLCKIEVLKDPIPL-NSRKNQDLMDSDEMHDVEV 268
+ L GYLR +L + VH++G GD+ L I L DP PL ++ K + L D +++ +
Sbjct: 286 VTLYGYLRGCNLKMGNKVHIAGVGDYSLAGITALPDPCPLPSAAKKKGLRDKEKLFYAPM 345
Query: 269 TG 270
+G
Sbjct: 346 SG 347
>Glyma12g05360.1
Length = 1160
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 141/314 (44%), Gaps = 19/314 (6%)
Query: 382 SDEETDNDSVMMEVDILTREKIQDELKEIKEAHAADEEFPDEVDTPLDVPARKRFAKYRG 441
++ E DND V + + L E E E H D F D+ A +R K
Sbjct: 646 ANTEEDNDDVYADFEDL-------ETGEKHENHRTDAAFAATTHKGDDLEAEERRLKKLA 698
Query: 442 LKSFRTSSWDPKESLPQDYAKIFEFDNFKRT---QKHV-LAKALEWEQENREDC--IPVG 495
L+ + + K Q + FD K QK + +A+ + ++ R + G
Sbjct: 699 LQEDTGNENEVKFHRGQANESSY-FDKLKEEIELQKQMNIAELNDLDEATRLEIEGFQTG 757
Query: 496 SYARLHIKEVPSAVASKLCMLAKTSPVIACGLLKHESKISVLHFSVKKHETYDAPIKSKE 555
+Y RL I++VP + P++ G+ E + + +K+H + +K+++
Sbjct: 758 TYLRLEIRDVPCEMVE---YFDPYHPILVGGIGIGEENVGYMQARLKRHRWHKKVLKTRD 814
Query: 556 ELIFHVGFRQFVGRPTFSSKFINTDKNKMERFLHAGHFSVASIYAPISFPPLPTIILKRD 615
+I VG+R++ P ++ + N +++M ++ +A + P++ P + ++
Sbjct: 815 PIIVSVGWRRYQTTPIYAIEDSNG-RHRMLKYTPEHMHCLAMFWGPLAPPNTGVVAIQNL 873
Query: 616 GEDAAP-RVAAVGSLKTVDSDRIILKRVILTGYPQRVSKRKASVKYMFYNPEDVKWFKPV 674
+ A R+ A + + I+K++ L GYP ++ K+ A +K MF + +V F+
Sbjct: 874 SNNQATFRITATAVVLEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGA 933
Query: 675 ELYTKRGLRGRIKE 688
+ T G+RG++K+
Sbjct: 934 AIRTVSGIRGQVKK 947
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 210 LLLTGYLRARSLCVNQLVHVSGAGDFQLCKIEVLKDPIPL-NSRKNQDLMDSDEMHDVEV 268
+ L GYLR +L + VH++G GD+ L I L DP PL ++ K + L D +++ +
Sbjct: 286 VTLYGYLRGCNLKMGNKVHIAGVGDYSLAGITALPDPCPLPSAAKKKGLRDKEKLFYAPM 345
Query: 269 TG 270
+G
Sbjct: 346 SG 347
>Glyma11g13340.1
Length = 1176
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 96/196 (48%), Gaps = 5/196 (2%)
Query: 494 VGSYARLHIKEVPSAVASKLCMLAKTSPVIACGLLKHESKISVLHFSVKKHETYDAPIKS 553
G+Y RL I +VP + P++ G+ E + + +K+H + +K+
Sbjct: 772 TGTYLRLEIHDVPCEMVE---YFDPYHPILVGGIGIGEENVGYMQARLKRHRWHKKVLKT 828
Query: 554 KEELIFHVGFRQFVGRPTFSSKFINTDKNKMERFLHAGHFSVASIYAPISFPPLPTIILK 613
++ +I VG+R++ P ++ + N +++M ++ +A + P++ P + +
Sbjct: 829 RDPIIVSVGWRRYQTTPIYAIEDSNG-RDRMLKYTPEHMHCLAMFWGPLAPPNTGVVAFQ 887
Query: 614 RDGEDAAP-RVAAVGSLKTVDSDRIILKRVILTGYPQRVSKRKASVKYMFYNPEDVKWFK 672
+ A R+ A + + I+K++ L GYP ++ K+ A +K MF + +V F+
Sbjct: 888 NLSNNQATFRITATAVVLEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFE 947
Query: 673 PVELYTKRGLRGRIKE 688
+ T G+RG++K+
Sbjct: 948 GAAIRTVSGIRGQVKK 963