Miyakogusa Predicted Gene

chr1.CM0150.650.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr1.CM0150.650.nd - phase: 0 
         (469 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC146746_11.5 Cyclase-associated protein chr04_pseudomolecu...   712   0.0  

>IMGA|AC146746_11.5 Cyclase-associated protein
           chr04_pseudomolecule_IMGAG_V2 19564285-19568641 E
           EGN_Mt071002 20080227
          Length = 472

 Score =  712 bits (1839), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/472 (75%), Positives = 388/472 (82%), Gaps = 3/472 (0%)

Query: 1   MEEKLIGRLESAVARLEALSVGFQXXXXXXDVADAATDPSIIAFDDLMGQYVARVSAAAE 60
           M+E LI RLESAV RLEALS G        D +DAA+DPS++AF DL+ QYV+R+S AA+
Sbjct: 1   MDETLIKRLESAVTRLEALSTGIHHSSSASDASDAASDPSVVAFVDLIDQYVSRLSKAAD 60

Query: 61  KIGGPVLEVTKVVQEAFAVQKQLLIKVKQSQKPNNAGLAEFLKPLNDVITKSSAMTEGRR 120
            IGG VL+VT  V+EAF+VQK+LLIK+KQ+QKP+ AGLAEFLKPLN+VI K+S++TEGRR
Sbjct: 61  IIGGQVLDVTNRVKEAFSVQKELLIKLKQTQKPDPAGLAEFLKPLNEVIMKASSLTEGRR 120

Query: 121 SDFFNHLKAAADSLTALAWIAFTGKDCGMSMPIAHVEESWQMSEFYCNKVLVEYRNKDPN 180
           SDFFNHLKAA DSL+ALAWIAFTGKDCGMSMPIAHVEESWQM+EFY NKVLVEYRNKDPN
Sbjct: 121 SDFFNHLKAAVDSLSALAWIAFTGKDCGMSMPIAHVEESWQMAEFYSNKVLVEYRNKDPN 180

Query: 181 HVEWAKALKELYLPGLRDYVKGFHPLGPVWSPTGSTIXXXXXXXXXXXXXXXXXXXXXXX 240
           HVEW KALKELYLPGLRDYVK FHPLGPVWS TG                          
Sbjct: 181 HVEWVKALKELYLPGLRDYVKSFHPLGPVWSQTGKVFAPSKVNASAAPAAPSAPPPPPAS 240

Query: 241 ---XXXXXXXXXKPKVGMSAVFREISTGNVTSGLRKVSDDMKTKNRTDRTGVVGSSEKES 297
                       KPKVGMSAVF+EI TGNVT+GLRKV+DDMKTKNR DR+GVVG+S KES
Sbjct: 241 LFSSESSQASSSKPKVGMSAVFQEIGTGNVTAGLRKVTDDMKTKNRADRSGVVGNSVKES 300

Query: 298 RAGSRAFSKTGPPKFELQMGRKWVVENQIGKKDLVIEDCDSKQSVYVYGCKDSVLQIQGK 357
           +A  RAFSK GPPK ELQMGRKWVVENQI +K LVIEDCDSKQSVYVYGCK+SVLQIQGK
Sbjct: 301 QAAPRAFSKVGPPKLELQMGRKWVVENQIDQKSLVIEDCDSKQSVYVYGCKNSVLQIQGK 360

Query: 358 VNNITIDKCTKMGVVFKDVVAACEIVNCNGVEVQCQGSAPTISVDNTSGCQLYLSKDSLE 417
           VNNITID C K GVVFKDVVAA E+VN NGVEVQCQGSAPTISVDNTSGCQ+YLSKDSLE
Sbjct: 361 VNNITIDNCKKTGVVFKDVVAAFEVVNSNGVEVQCQGSAPTISVDNTSGCQIYLSKDSLE 420

Query: 418 TSISTAKSSEINVLVPGAEPDGDLVEHSLPQQYIHAFKDGRFETTPASHSGG 469
           TSISTAKSSEINVLVP  E DGD VEHSLPQQYIH FK+GRFETTPASHSGG
Sbjct: 421 TSISTAKSSEINVLVPNVESDGDWVEHSLPQQYIHLFKEGRFETTPASHSGG 472