Miyakogusa Predicted Gene

chr1.CM0133.1540.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr1.CM0133.1540.nc - phase: 0 
         (412 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g06310.1                                                       677   0.0  
Glyma06g06360.1                                                       405   e-113
Glyma13g16390.1                                                        49   9e-06

>Glyma04g06310.1
          Length = 423

 Score =  677 bits (1748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/395 (82%), Positives = 352/395 (89%), Gaps = 2/395 (0%)

Query: 1   MKIAVEGCMHGDLDKVYKTLQHMEKTQNTKIDLLLCCGDFQAVRNENDLKSLNVLPKYRE 60
           MKIAVEGCMHGDLD VY+TLQ +EK++NTKIDLLLCCGDFQAVRNE+DLKSLNV  KYR 
Sbjct: 1   MKIAVEGCMHGDLDNVYRTLQQLEKSENTKIDLLLCCGDFQAVRNEHDLKSLNVPLKYRS 60

Query: 61  MKSFWKYYSGLEVAPYPTIFIGGNHEASNYLWELYYGGWVAPNIYYLGAAGVVRFGNIRI 120
           M SFWKYYSG EVAPYPTIFIGGNHEASNYLWELYYGGW APNIY+LGAAGVVRFGN+RI
Sbjct: 61  MNSFWKYYSGAEVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGAAGVVRFGNVRI 120

Query: 121 GGLSGIFNGRHYNLGHFERPPYDQSTIRSVYHVREYDVQKLNQVQEPIDIFLSHDWPVRI 180
           GGLSGI+    Y LGHFERPPYD +TI+SVYHVREYDV+KL QV+EPID+FLSHDWPVRI
Sbjct: 121 GGLSGIYKSFDYKLGHFERPPYDHNTIKSVYHVREYDVRKLMQVKEPIDVFLSHDWPVRI 180

Query: 181 TDYGDWEELVRKKSDFKQEIEEKRLGSKPAALLLERLKPHYWFSAHLHCKFSALVQHGEG 240
           TDYGDW ELVR+K  FKQEIEEKRLGSKPAA LLE+LKPHYWFSAHLHCKF+ALVQHGEG
Sbjct: 181 TDYGDWRELVRRKHYFKQEIEEKRLGSKPAAELLEKLKPHYWFSAHLHCKFAALVQHGEG 240

Query: 241 GPLTKFLALDKCIPGRDFLQIVEIESEPGPYEILYDEEWLAITRRFNSIFPLTTKGADFR 300
           GPLTKFLALDKCIPGRDFLQIVEIES+ GPYEI YDEEWLAITR+FN IFPLT KGADFR
Sbjct: 241 GPLTKFLALDKCIPGRDFLQIVEIESDAGPYEIQYDEEWLAITRKFNPIFPLTYKGADFR 300

Query: 301 AVNLEMEDCREWVRSRLRERGCKPFEFVKTAPCYDDPSQSSSDGAFTASPRNPQTESXXX 360
            +NLEMEDC EWVRS+L+ERGCKPFEFV+TAPCY DPS+S+ DGAF  +PRNPQTES   
Sbjct: 301 GINLEMEDCLEWVRSKLQERGCKPFEFVRTAPCY-DPSRSNFDGAFAVNPRNPQTESFVR 359

Query: 361 XXXXXXXXDRNPEEKNLSPYPSPSIQRGPVAYDNK 395
                   DRNPE K+LSPYPSPSIQRG  AYD++
Sbjct: 360 LLELPYLFDRNPEAKDLSPYPSPSIQRG-TAYDSE 393


>Glyma06g06360.1
          Length = 352

 Score =  405 bits (1040), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 203/290 (70%), Positives = 222/290 (76%), Gaps = 25/290 (8%)

Query: 87  ASNYLWELYYGGWVAPNIYYLGAAGVVRFGNIRIGGLSGIFNGRHYNLGHFERPPYDQST 146
           + NY   LYYGGW APNIY L AAGVVRFGN RIGGLSGI+    Y LGHFERPPYD +T
Sbjct: 87  SQNYCCRLYYGGWAAPNIYILRAAGVVRFGNFRIGGLSGIYKSFDYKLGHFERPPYDHNT 146

Query: 147 IRSVYHVREYDVQKLNQVQEPIDIFLSHDWPVRITDYGDWEELVRKKSDFKQEIEEKRLG 206
           I+SVYHV EYDV+KL QV+E ID+FLSHDWPVRITD+GDW EL          IEEKRLG
Sbjct: 147 IKSVYHVCEYDVRKLMQVKELIDVFLSHDWPVRITDHGDWREL----------IEEKRLG 196

Query: 207 SKPAALLLERLKPHYWFSAHLHCKFSALVQHGEGGPLTKFLALDKCIPGRDFLQIVEIES 266
           SKPAA LLE+LKPHYWFSAHLHCKF+ LVQHGEGGPLTKFL LDKCI G DFLQIVEIES
Sbjct: 197 SKPAAELLEKLKPHYWFSAHLHCKFATLVQHGEGGPLTKFLVLDKCIAGCDFLQIVEIES 256

Query: 267 EPGPYEILYDEEWLAITRRFNSIFPLTTKGADFRAVNLEMEDCREWVRSRLRERGCKPFE 326
           + GPYEI  DEEWLAITR+FN IFPLT KGADFR +NLEMEDC EWVRSRL+ERGCKPFE
Sbjct: 257 DAGPYEIQCDEEWLAITRKFNHIFPLTYKGADFRGINLEMEDCLEWVRSRLQERGCKPFE 316

Query: 327 FVKTAPCYDDPSQSSSDGAFTASPRNPQTESXXXXXXXXXXXDRNPEEKN 376
           FV++AP                +P+NPQTES           DRNPE K+
Sbjct: 317 FVRSAP---------------LNPQNPQTESFLRLLELPYLLDRNPEAKD 351


>Glyma13g16390.1
          Length = 601

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/235 (21%), Positives = 93/235 (39%), Gaps = 53/235 (22%)

Query: 2   KIAVEGCMHGDLDKVYKTLQHMEKTQNTKIDLLLCCGDFQAVRNENDLKSLNVLPKYREM 61
           +I + G + G L++++K +  + K+     D LLC G F     E             ++
Sbjct: 4   RILLCGDVLGRLNQLFKRVSSVNKSAGP-FDALLCVGQFFPDSPE-------------QL 49

Query: 62  KSFWKYYSGLEVAPYPTIFIG------------GNHEASNYLWELYYGGWVAPNIYYLGA 109
           + F KY  G    P PT F+G             + +++N  +++  G  V  N+Y+L  
Sbjct: 50  EDFTKYIEGGSHFPLPTYFVGDYGVAAPKLLLQASKDSANQGFKM-DGFKVCHNLYWLKG 108

Query: 110 AGVVRFGNIRIGGLSGIFNGRHYNLGHFERPPYDQSTIRSVYHVREYDVQKLNQVQEP-- 167
           +G      + +  LSG  +      G +                 E DV  L  + E   
Sbjct: 109 SGKFSLFGLSVAYLSGRKSSSAQQFGTYT----------------EDDVDALRAIAEEPG 152

Query: 168 -IDIFLSHDWPVRITDYGDWEELVRKKSDFKQEIEEKRLGSKPAALLLERLKPHY 221
            +D+FL+++WP  +T+           SD    + +   G    + L++ +KP Y
Sbjct: 153 IVDLFLTNEWPSGVTNRA-------ADSDIPAGLSDAAGGDSTVSELVQEIKPRY 200