Miyakogusa Predicted Gene

chr1.CM0133.1540.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr1.CM0133.1540.nc - phase: 0 
         (412 letters)

Database: TAIR8_pep 
           32,825 sequences; 13,166,001 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G31770.1 | Symbols:  | calcineurin-like phosphoesterase famil...   555   e-158

>AT4G31770.1 | Symbols:  | calcineurin-like phosphoesterase family
           protein | chr4:15370302-15372428 REVERSE
          Length = 418

 Score =  555 bits (1429), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 262/355 (73%), Positives = 299/355 (84%), Gaps = 3/355 (0%)

Query: 1   MKIAVEGCMHGDLDKVYKTLQHMEKTQNTKIDLLLCCGDFQAVRNENDLKSLNVLPKYRE 60
           MKIA+EGCMHGDLD VYKT+QH E+  NTK+DLLLCCGDFQAVRNE D+ SLNV  KYRE
Sbjct: 1   MKIAIEGCMHGDLDNVYKTIQHYEQIHNTKVDLLLCCGDFQAVRNEKDMDSLNVPRKYRE 60

Query: 61  MKSFWKYYSGLEVAPYPTIFIGGNHEASNYLWELYYGGWVAPNIYYLGAAGVVRFGNIRI 120
           MKSFWKYYSG EVAP PTIFIGGNHEASNYLWELYYGGW A NIY+LG AGVV+FGN+RI
Sbjct: 61  MKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAATNIYFLGFAGVVKFGNVRI 120

Query: 121 GGLSGIFNGRHYNLGHFERPPYDQSTIRSVYHVREYDVQKLNQVQEPIDIFLSHDWPVRI 180
           GGLSGI+N RHY  GHFERPPY++STIRSVYHVR+YDVQKL Q++EP+DIFLSHDWPV I
Sbjct: 121 GGLSGIYNERHYRSGHFERPPYNESTIRSVYHVRDYDVQKLMQLEEPLDIFLSHDWPVGI 180

Query: 181 TDYGDWEELVRKKSDFKQEIEEKRLGSKPAALLLERLKPHYWFSAHLHCKFSALVQHGEG 240
           TDYGD E L+R+K  F+QEIEEK LGSKPAALLLE+LKP YWFSAHLHCKF+A VQHG  
Sbjct: 181 TDYGDSESLMRQKPYFRQEIEEKTLGSKPAALLLEKLKPQYWFSAHLHCKFAAAVQHGND 240

Query: 241 GPLTKFLALDKCIPGRDFLQIVEIESEPGPYEILYDEEWLAITRRFNSIFPLTTKGADFR 300
           G +TKFLALDKC+PG+ FLQI+EIESEPGP+E+LYDEEWLAITR+FNSIFPLT +  +  
Sbjct: 241 GSVTKFLALDKCLPGKKFLQIIEIESEPGPFEVLYDEEWLAITRKFNSIFPLTRRYTNVS 300

Query: 301 AVNLEMEDCREWVRSRLRERGCKPFEFVKTAPCYDDPSQSSSDGAFTASPRNPQT 355
                +++ REWVR +L ER  KPFEF +T P Y +PSQ   D +    P+NPQT
Sbjct: 301 TAGT-IQESREWVRKKLEERQFKPFEFARTVPAY-NPSQRVFD-SIPEIPQNPQT 352