Miyakogusa Predicted Gene
- chr1.CM0122.710.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr1.CM0122.710.nd - phase: 0
(462 letters)
Database: Medicago_aa2.0
38,834 sequences; 10,231,785 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC135465_36.4 Zinc finger, CCHC-type chr07_pseudomolecule_I... 318 4e-87
IMGA|AC135465_35.4 Zinc finger, CCHC-type chr07_pseudomolecule_... 249 2e-66
IMGA|AC166707_35.4 hypothetical protein chr01_pseudomolecule_IMG... 41 9e-04
>IMGA|AC135465_36.4 Zinc finger, CCHC-type
chr07_pseudomolecule_IMGAG_V2 29422498-29420170 E
EGN_Mt071002 20080227
Length = 292
Score = 318 bits (814), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 174/261 (66%), Positives = 188/261 (72%), Gaps = 13/261 (4%)
Query: 1 MANRPDPDNDDDFLELYKEYTGPLGSTAATNTQEGAKSNKRSNAGSDEEDEPRDPNAVPT 60
MAN PDPD DDDF +LYKEYTGP GS + QE AKSNKRSNAGSDEEDE RDPNA+PT
Sbjct: 1 MANIPDPDIDDDFRDLYKEYTGPAGSGS---VQERAKSNKRSNAGSDEEDEVRDPNAIPT 57
Query: 61 DFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFER 120
F SR+AKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGAN KSQ+ F+R
Sbjct: 58 GFISRDAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANNKSQELFQR 117
Query: 121 IPARDKNVRALFTEKVISKIERDTGCKIKMDEKFIIVSGKDRLIFSKGVDAVHKVREEGD 180
IPARD++VRALFTEKVISKIERD GCKIKMDEKFIIVSGKDRL+ +KGVDAVHK+REEG+
Sbjct: 118 IPARDRSVRALFTEKVISKIERDIGCKIKMDEKFIIVSGKDRLVMAKGVDAVHKIREEGE 177
Query: 181 QKGTXXXXXXXXXXXXXXX----------XXARFNRSEPQRSHSGPXXXXXXXXXXXXPX 230
QKG+ +RF RSEPQRSHS P
Sbjct: 178 QKGSSSSQINRSRSPPPHRSRSPPPLRSPVNSRFQRSEPQRSHSAPRNTPQFPQRFGRQE 237
Query: 231 XXXXXXXXXXXQKFARGSPQA 251
QKFAR S QA
Sbjct: 238 RAVDDRVREDTQKFARDSQQA 258
>IMGA|AC135465_35.4 Zinc finger, CCHC-type
chr07_pseudomolecule_IMGAG_V2 29420168-29418399 E
EGN_Mt071002 20080227
Length = 180
Score = 249 bits (635), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/172 (77%), Positives = 148/172 (86%), Gaps = 1/172 (0%)
Query: 287 MGTYRNDGWDSHRRESGFQPGHQLDYSASPQTLEELELEYKNEAVELMKSRDREEDEENF 346
MGTYRNDGWDSHRRESG QPG Q D++A P TLEELELEYK EA+ELMK RDREEDEEN
Sbjct: 1 MGTYRNDGWDSHRRESGIQPGQQFDHNAPPHTLEELELEYKKEAMELMKIRDREEDEENL 60
Query: 347 KHREAIRDLREKYMSKVALLRATHAKKWDEFLQLDARRCQQQAIQHMPPSGYRGYKQQNF 406
KHREAIRDLREKYM+KVAL+ +THAK+WDEF QLDA+R QQQAIQ M P GYRGYKQQNF
Sbjct: 61 KHREAIRDLREKYMNKVALMSSTHAKQWDEFFQLDAQRRQQQAIQQMSP-GYRGYKQQNF 119
Query: 407 SEYDGSTANPPYAGTNFPMEPKNRFSDTMETYPTRSHDNFGEFQRRGDFAKA 458
++YD S NPPY G N P+E +NRFS++ME YPTR H NFGEFQRRGDFAKA
Sbjct: 120 ADYDRSPVNPPYGGNNLPLESRNRFSNSMEPYPTRPHGNFGEFQRRGDFAKA 171
>IMGA|AC166707_35.4 hypothetical protein
chr01_pseudomolecule_IMGAG_V2 22923186-22926320 F
EGN_Mt071002 20080227
Length = 253
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 309 QLDYSASPQT--LEELELEYKNEAVELMKSRDREEDEENFKHREAIRDLREKYMSKVALL 366
++ Y SP T E LE + +E ++L++ R +ED E +H E I ++ ++ K++ L
Sbjct: 85 EIGYDESPPTPTYEGLEQRFIDEIMKLVQDRSDKEDAEFARHNERIVEINTEFQEKLSSL 144
Query: 367 RATHAKKWDEFLQLDAR-RCQQQAIQHMPPSGYRGYKQQNFSEY 409
RA + +EFL+ +A+ R Q QH+ + Y K ++ + Y
Sbjct: 145 RALQETRREEFLRKEAQARLNQD--QHVKRNRYPAIKVEDANGY 186