Miyakogusa Predicted Gene

chr1.CM0113.140.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr1.CM0113.140.nc - phase: 0 
         (153 letters)

Database: Medicago_aa2.0 
           38,834 sequences; 10,231,785 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC140722_13.5 Dehydrin chr03_pseudomolecule_IMGAG_V2 331872...    69   9e-13

>IMGA|AC140722_13.5 Dehydrin chr03_pseudomolecule_IMGAG_V2
          33187277-33186262 E EGN_Mt071002 20080227
          Length = 196

 Score = 68.9 bits (167), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 30/36 (83%), Positives = 33/36 (91%)

Query: 1  MAEAQIRDQYGNPIQLTDQFGNPVKLTDEHGNPIHL 36
          MA  QIRD++GNPIQLTD+ GNPVKLTDEHGNPIHL
Sbjct: 1  MAGVQIRDEHGNPIQLTDELGNPVKLTDEHGNPIHL 36