Miyakogusa Predicted Gene

chr1.CM0105.1090.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr1.CM0105.1090.nc
         (2798 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

R_KMC001627A_C01 R_KMC001627A_c01                                     147   4e-35

>R_KMC001627A_C01 R_KMC001627A_c01
          Length = 723

 Score =  147 bits (74), Expect = 4e-35
 Identities = 125/142 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1229 aggctcgcaaaattattgcaatgttgagtcaagattttatatttgatggttgtacaattt 1288
            |||||||||| |||||||||||| || | |||||||||||||||||||||||||| || |
Sbjct: 563  aggctcgcaagattattgcaatgctgggccaagattttatatttgatggttgtacgatct 622

                                                                        
Query: 1289 tagttcatggtttctccagagttgtctttgaagttctaaagctcgcagcacagaataaga 1348
            | |||||||||||||| ||||||||||||||| |||| || || || || ||||||||||
Sbjct: 623  tggttcatggtttctctagagttgtctttgaacttctcaaactggctgcgcagaataaga 682

                                  
Query: 1349 aacttttccgggtcttctgcac 1370
            | || ||||||||| |||||||
Sbjct: 683  agctgttccgggtcctctgcac 704



 Score = 75.8 bits (38), Expect = 1e-13
 Identities = 116/142 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1005 ggataccacctctatctctttgaccgcgggctgcgatctgttcatgcgatatgtaacaag 1064
            |||||| ||||| ||||| ||||| || |  || ||| |||| ||| ||||||| |||||
Sbjct: 417  ggatacgacctcgatctcgttgacagcagcatgtgatttgtttatgagatatgtgacaag 476

                                                                        
Query: 1065 gaccgctgctttagaatatgaagacttcaactcggctaaatctcgcctcattgaacgtgc 1124
            |||  ||||||| ||||||||| ||||||| ||||| ||||| ||  | ||||| || ||
Sbjct: 477  gacttctgctttggaatatgaaaacttcaattcggcaaaatcgcgtttgattgagcgcgc 536

                                  
Query: 1125 cgacaagtttggggaaatctcc 1146
             || ||||||||||||||||||
Sbjct: 537  tgaaaagtttggggaaatctcc 558



 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 789 ttggccgaggccgtcgccgccattcgcgccttggccgccgtcat 832
           ||||| |||||||||||||||||||||||| | ||||| |||||
Sbjct: 298 ttggctgaggccgtcgccgccattcgcgccctcgccgctgtcat 341