Miyakogusa Predicted Gene
- chr1.CM0094.60.nc
BLASTN 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= chr1.CM0094.60.nc
(5184 letters)
Database: lotus_EST_unigene
20,423 sequences; 9,996,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AV767128 MWM154h05_f 274 2e-72
KMC013995A_C01 KMC013995A_c01 90 5e-17
AV773732 MPD056b04_f 52 1e-05
>AV767128 MWM154h05_f;
Length = 267
Score = 274 bits (138), Expect = 2e-72
Identities = 180/194 (92%)
Strand = Plus / Minus
Query: 4561 aatagattacggtgaatttgctgctatgatgagaaagggtaatattggagggatcggtag 4620
|||||||| ||||| ||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 194 aatagatttcggtggatttgctgctatgattaaaaagggtaatattggagggatcggtag 135
Query: 4621 gcgaaccatgagaagcacgctcaatttcagagatgctctgggaatcacaagcaatgtgtc 4680
||||||||||| ||||||||||||||||| | ||||| |||||||||||| |||||||||
Sbjct: 134 gcgaaccatgaaaagcacgctcaatttcaaaaatgctttgggaatcacaaacaatgtgtc 75
Query: 4681 catttaaggtcttgtactttgagaaatcattgtgtaatgaaaattttgaacgatgaacac 4740
|||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 74 catttaaggtcttggactttgaaaaatccttgtgtaatgaaaattttgaacgatgaacac 15
Query: 4741 tttgacaacttaaa 4754
|||| | |||||||
Sbjct: 14 tttgcccacttaaa 1
Score = 115 bits (58), Expect = 9e-25
Identities = 64/66 (96%)
Strand = Plus / Minus
Query: 4103 gtaaggaatttggtttggatgatatccatattgatgatatggtcaaagaaattgatcaag 4162
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 267 gtaaggaaattggtttggatgatatccctattgatgatatggtcaaagaaattgatcaag 208
Query: 4163 ataatg 4168
||||||
Sbjct: 207 ataatg 202
>KMC013995A_C01 KMC013995A_c01;
Length = 731
Score = 89.7 bits (45), Expect = 5e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 2060 gacgtatcgcccaaattattggtccggtactagatgtaccttttaccccaggaaagatgc 2119
|||||||||||||||| ||||||||||||||||||||| ||||| ||||||| |||||||
Sbjct: 304 gacgtatcgcccaaataattggtccggtactagatgtaacttttcccccagggaagatgc 363
Query: 2120 c 2120
|
Sbjct: 364 c 364
>AV773732 MPD056b04_f;
Length = 503
Score = 52.0 bits (26), Expect = 1e-05
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 2060 gacgtatcgcccaaattattggtccggtactagatgtac-cttttaccccaggaaagatg 2118
||||| ||||||| || || ||||||| |||||||||| ||||| ||||||||||||||
Sbjct: 298 gacgtctcgcccagataatgggtccgggactagatgtagacttttcccccaggaaagatg 357
Query: 2119 cc 2120
||
Sbjct: 358 cc 359