Miyakogusa Predicted Gene

chr1.CM0094.340.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr1.CM0094.340.nc
         (6742 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AV407003  MWL013b10_r                                                 202   2e-51

>AV407003  MWL013b10_r;
          Length = 222

 Score =  202 bits (102), Expect = 2e-51
 Identities = 114/118 (96%)
 Strand = Plus / Plus

                                                                        
Query: 987  aggaggtgacttttagagttgattacaatgtggcgtccatcaatcgagactttggaaccg 1046
            ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |
Sbjct: 71   aggaggtgacttttagagttgattacagtgtggcatccatcaatcgagactttggaactg 130

                                                                      
Query: 1047 tttttcttggtgagaagaatgttggggtgttggttgtttctcaaggatgggcaaaggt 1104
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131  tttttcttggtgacaagaatgttggggtgttggttgtttctcaaggatgggcaaaggt 188



 Score =  119 bits (60), Expect = 2e-26
 Identities = 70/72 (97%), Gaps = 1/72 (1%)
 Strand = Plus / Plus

                                                                       
Query: 814 ggagaggcggtgtggatgaaccatttgcatgggaaagcagagagtatctgaggaagctct 873
           |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   ggagaggcggtg-gcatgaaccatttgcatgggaaagcagagagtatctgaggaagctct 61

                       
Query: 874 gcatagggaagg 885
           ||||||||||||
Sbjct: 62  gcatagggaagg 73



 Score = 67.9 bits (34), Expect = 7e-11
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                  
Query: 1198 aggtcagagaacagggccagcagaaaggagaagtgagt 1235
            |||||||||||||||| |||||||||||||||||||||
Sbjct: 185  aggtcagagaacaggggcagcagaaaggagaagtgagt 222