Miyakogusa Predicted Gene

chr1.CM0094.310.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr1.CM0094.310.nc
         (6704 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AV407003  MWL013b10_r                                                 218   3e-56

>AV407003  MWL013b10_r;
          Length = 222

 Score =  218 bits (110), Expect = 3e-56
 Identities = 116/118 (98%)
 Strand = Plus / Plus

                                                                        
Query: 999  aggaggtaacttttagagttgattacagtgtggcatccatcaatcgagactttggaactg 1058
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71   aggaggtgacttttagagttgattacagtgtggcatccatcaatcgagactttggaactg 130

                                                                      
Query: 1059 tttttcttggtgacaagaatgttggggtgttggttgtttctcaagggtgggcaaaggt 1116
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 131  tttttcttggtgacaagaatgttggggtgttggttgtttctcaaggatgggcaaaggt 188



 Score =  119 bits (60), Expect = 2e-26
 Identities = 70/72 (97%), Gaps = 1/72 (1%)
 Strand = Plus / Plus

                                                                       
Query: 823 ggagaggcggtgtggatgaaccatttgcatgggaaagcagagagtatctgaggaagctct 882
           |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   ggagaggcggtg-gcatgaaccatttgcatgggaaagcagagagtatctgaggaagctct 61

                       
Query: 883 gcatagggaagg 894
           ||||||||||||
Sbjct: 62  gcatagggaagg 73



 Score = 75.8 bits (38), Expect = 3e-13
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                  
Query: 1214 aggtcagagaacaggggcagcagaaaggagaagtgagt 1251
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 185  aggtcagagaacaggggcagcagaaaggagaagtgagt 222