Miyakogusa Predicted Gene

chr1.CM0094.310.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr1.CM0094.310.nc + phase: 0 
         (990 letters)

Database: TAIR8_pep 
           32,825 sequences; 13,166,001 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G07350.1 | Symbols:  | tudor domain-containing protein / nucl...  1446   0.0  
AT5G61780.1 | Symbols:  | tudor domain-containing protein / nucl...  1422   0.0  

>AT5G07350.1 | Symbols:  | tudor domain-containing protein /
           nuclease family protein | chr5:2320345-2324893 REVERSE
          Length = 991

 Score = 1446 bits (3742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 713/983 (72%), Positives = 834/983 (84%), Gaps = 13/983 (1%)

Query: 5   ATGATG-WYRGRVKAVPSGDCLVIVAVASSKPGPLPEKSITLSSLIAPRLARRGGVDEPF 63
           ATGA   W +GRVKAV SGDCLVI A++ ++ GP PEK+IT SSL+AP++ARRGG+DEPF
Sbjct: 2   ATGAENQWLKGRVKAVTSGDCLVITALSHNRAGPPPEKTITFSSLMAPKMARRGGIDEPF 61

Query: 64  AWESREYLRKLCIGKEVTFRVDYSVASI-NRDFGTVFLGDKNVGVLVVSQGWAKVREQGQ 122
           AWES+E+LRKLCIGKEV F+VDY V +I  R+FG+VFLG++N+  LVV  GWAKVRE GQ
Sbjct: 62  AWESKEFLRKLCIGKEVAFKVDYKVEAIAGREFGSVFLGNENLAKLVVKTGWAKVREPGQ 121

Query: 123 Q-KGEVSPYLAELLRLEEQAKQEGLGRWSKVPGAAEASIRNLPPSAIGDASNFDAMGLLA 181
           Q + +VSPY+ ELL+LEE AKQEG GRWSKVPGAAEASIRNLPPSAIGD++ FDAMGLLA
Sbjct: 122 QNQDKVSPYIKELLQLEELAKQEGYGRWSKVPGAAEASIRNLPPSAIGDSAGFDAMGLLA 181

Query: 182 ANKGSPMEAIVEQVRDGSTLRVYLLPEFQFVQVFVAGIQSPQMGRRAAPETVVETELTVD 241
           ANKG PME IVEQVRDGST+RVYLLPEFQFVQVFVAG+Q+P MGRR    +VVET    D
Sbjct: 182 ANKGKPMEGIVEQVRDGSTIRVYLLPEFQFVQVFVAGVQAPSMGRRTTNGSVVET--VPD 239

Query: 242 DNGGDVPGEPRPPLTSAQRLAVTTTTETAA--DPFGPDAKFFTEMRVLNRDVRIVLEGVD 299
           +  GDV  E R PLT+AQRLA +  +      DPF  +AK+FTE RVL+RDVRIVLEGVD
Sbjct: 240 EPNGDVSAESRGPLTTAQRLAASAASSVEVSSDPFATEAKYFTEHRVLSRDVRIVLEGVD 299

Query: 300 KFSNLIGSVYYPDGESAKDLALELVENGYAKYVEWSANMMEEEAKRRLKTAELEAKKSRL 359
           KF+NLIGSV+Y DGE+ KDL LELVENG AK+VEWSANMMEEEAK++LK AEL+ KK ++
Sbjct: 300 KFNNLIGSVHYSDGETVKDLGLELVENGLAKFVEWSANMMEEEAKKKLKAAELQCKKDKV 359

Query: 360 RMWTNYVPPASNSKAIHNQNFTGKVVEVVSGDCIIVADDSIPYGSPLAERRVNLSSIRCP 419
           +MW NYVPPA+NSKAIH+QNFTGKVVEVVSGDC+IVADD++P+GSP AERRV LSSIR P
Sbjct: 360 KMWANYVPPATNSKAIHDQNFTGKVVEVVSGDCLIVADDAVPFGSPAAERRVCLSSIRSP 419

Query: 420 KVGNPRRDEKPAPYAREAKEFLRTRLLGRQVNVEMEYSRKIVPTDGSAVPSPAADSRVMD 479
           K+GNPRR+EKPAPYAREA+EFLR RL+G+QV V+MEYSRK+   DG    S AAD R MD
Sbjct: 420 KMGNPRREEKPAPYAREAREFLRQRLIGKQVIVQMEYSRKVTQGDGPTT-SGAAD-RFMD 477

Query: 480 FGSVFLLSATKADSDDT--PSSVPSAGSQPTGVNVGELVVGRGFGTVIRHRDFEERSNYY 537
           FGSVFL SA KADSD+   P +   AGSQP GVN+ ELV+ RGFG V+RHRDFEERSN+Y
Sbjct: 478 FGSVFLPSAAKADSDEVTAPPAAAIAGSQPVGVNIAELVLVRGFGNVVRHRDFEERSNHY 537

Query: 538 DALLTAESRALSGRKGIHSAKDPPVMHITDLTTTSAKKAKDFLPFLHRSRRVPAVVEYVL 597
           DALL AE+RAL+G+KGIHSAK+ P MHITDLT ++AKKAKDFLP L R RR+PAVVEYVL
Sbjct: 538 DALLAAEARALAGKKGIHSAKESPAMHITDLTVSAAKKAKDFLPSLQRIRRIPAVVEYVL 597

Query: 598 SGHRFKLLIPKETCSIAFALSGVRCPGRGEPYSEEAIALMRRKIMQRDVEIEVETVDRNG 657
           SGHRFKL IPK TCSIAF+ SGVRCPGRGEPYSEEAI++MRR+IMQRDVEIEVETVDR G
Sbjct: 598 SGHRFKLYIPKITCSIAFSFSGVRCPGRGEPYSEEAISVMRRRIMQRDVEIEVETVDRTG 657

Query: 658 TFLGSLWESRTNVALTLLEAGLAKLQTSFGSDRIPEFHLLDRAEQSAKKQKLKIWENFVE 717
           TFLGS+WESRTNVA  LLEAGLAK+QTSFG+DRI E HLL++AE+SAK QKLKIWEN+VE
Sbjct: 658 TFLGSMWESRTNVATVLLEAGLAKMQTSFGADRIAEAHLLEQAERSAKNQKLKIWENYVE 717

Query: 718 GEEVSNG--ANVESKQQEVLKVIVTEVLGGGKFYVQTVGDQKIASIQQQLAALNLKEAPV 775
           GEEVSNG    VE++Q+E LKV+VTEVLGGG+FYVQ+ GDQKIASIQ QLA+L++K+AP+
Sbjct: 718 GEEVSNGNTNTVETRQKETLKVVVTEVLGGGRFYVQSAGDQKIASIQNQLASLSIKDAPI 777

Query: 776 LGAFSPKKGDIVLCYFHADKSWYRAMVVNTPRGPVESPEDIFEVFYIDYGNQEQVAYSQL 835
           +G+F+PK+GDIVL  F  D SW RAM+V  PR  V+SP++ FEVFYIDYGNQE V YS +
Sbjct: 778 IGSFNPKRGDIVLAQFSLDNSWNRAMIVTAPRAAVQSPDEKFEVFYIDYGNQETVPYSAI 837

Query: 836 RPLDPSVSAAPGLAQLCSLAYIKSPNVEEDFGQEAAEYLCELTLNSGKEFRAQVEERDTS 895
           RP+DPSVSAAPGLAQLC LAYIK P++E+DFG EA EYL  +TL SGKEF+A +EERDTS
Sbjct: 838 RPIDPSVSAAPGLAQLCRLAYIKVPSLEDDFGPEAGEYLHTVTLGSGKEFKAVIEERDTS 897

Query: 896 GGKLKGQGTGTILAVTLVAVDAEISVNAAMLQEGLARMEKRNRWDRKERKVGLDSLEKFQ 955
           GGK+KGQGTGT   VTL+AVD EISVNAAMLQEG+ARMEKR +W  K ++  LD+LEKFQ
Sbjct: 898 GGKVKGQGTGTEFVVTLIAVDDEISVNAAMLQEGIARMEKRQKWGHKGKQAALDALEKFQ 957

Query: 956 DDARKERRGMWQYGDVESDDEDN 978
           ++ARK R G+WQYGD+ESDDED 
Sbjct: 958 EEARKSRIGIWQYGDIESDDEDT 980


>AT5G61780.1 | Symbols:  | tudor domain-containing protein /
           nuclease family protein | chr5:24839238-24843867 FORWARD
          Length = 985

 Score = 1422 bits (3681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 704/986 (71%), Positives = 827/986 (83%), Gaps = 18/986 (1%)

Query: 1   MASAATGATGWYRGRVKAVPSGDCLVIVAVASSKPGPLPEKSITLSSLIAPRLARRGGVD 60
           MA+ A     W +GRVKAV SGDCLVI A+  ++ GP PEK+ITLSSL+AP++ARRGG+D
Sbjct: 1   MATGAATENQWLKGRVKAVTSGDCLVITALTHNRAGPPPEKTITLSSLMAPKMARRGGID 60

Query: 61  EPFAWESREYLRKLCIGKEVTFRVDYSVASI-NRDFGTVFLGDKNVGVLVVSQGWAKVRE 119
           EPFAWESRE+LRKLCIGKEV F+VDY V +I  R+FG+V+LG++N+  LVV  GWAKVR 
Sbjct: 61  EPFAWESREFLRKLCIGKEVAFKVDYKVEAIAGREFGSVYLGNENLAKLVVQNGWAKVRR 120

Query: 120 QGQQ-KGEVSPYLAELLRLEEQAKQEGLGRWSKVPGAAEASIRNLPPSAIGDASNFDAMG 178
            GQQ + +VSPY+AEL +LEEQA+QEG GRWSKVPGAAEASIRNLPPSA+GD+ NFDAMG
Sbjct: 121 PGQQNQDKVSPYIAELEQLEEQAQQEGFGRWSKVPGAAEASIRNLPPSAVGDSGNFDAMG 180

Query: 179 LLAANKGSPMEAIVEQVRDGSTLRVYLLPEFQFVQVFVAGIQSPQMGRR-AAPETVVETE 237
           LLAA+KG PME IVEQVRDGST+RVYLLPEFQFVQVFVAG+Q+P MGRR +  E VV+ +
Sbjct: 181 LLAASKGKPMEGIVEQVRDGSTIRVYLLPEFQFVQVFVAGLQAPSMGRRQSTQEAVVDPD 240

Query: 238 LTVDDNGGDVPGEPRPPLTSAQRLAVTTTTETAA--DPFGPDAKFFTEMRVLNRDVRIVL 295
           +T   NG D   E R PLT+AQRLA +  +      DPF  +AK+FTE+RVLNRDVRIVL
Sbjct: 241 VTATSNG-DASAETRGPLTTAQRLAASAASSVEVSSDPFAMEAKYFTELRVLNRDVRIVL 299

Query: 296 EGVDKFSNLIGSVYYPDGESAKDLALELVENGYAKYVEWSANMMEEEAKRRLKTAELEAK 355
           EGVDKF+NLIGSVYY DG++ KDL LELVENG AKYVEWSANM++EEAK++LK  EL+ K
Sbjct: 300 EGVDKFNNLIGSVYYSDGDTVKDLGLELVENGLAKYVEWSANMLDEEAKKKLKATELQCK 359

Query: 356 KSRLRMWTNYVPPASNSKAIHNQNFTGKVVEVVSGDCIIVADDSIPYGSPLAERRVNLSS 415
           K+R++MW NYVPPASNSKAIH+QNFTGKVVEVVSGDC++VADDSIP+GSP+AERRV LSS
Sbjct: 360 KNRVKMWANYVPPASNSKAIHDQNFTGKVVEVVSGDCLVVADDSIPFGSPMAERRVCLSS 419

Query: 416 IRCPKVGNPRRDEKPAPYAREAKEFLRTRLLGRQVNVEMEYSRKIVPTDGSAVPSPAADS 475
           IR PK+GNPRR+EKPAPYAREAKEFLR +L+G +V V+MEYSRKI P DG  V +  A  
Sbjct: 420 IRSPKMGNPRREEKPAPYAREAKEFLRQKLIGMEVIVQMEYSRKISPGDG--VTTSGAGD 477

Query: 476 RVMDFGSVFLLSATKADSDDTPSSVPSAGSQPTGVNVGELVVGRGFGTVIRHRDFEERSN 535
           RVMDFGSVFL S TK D+    ++ P       G N+ EL++ RG GTV+RHRDFEERSN
Sbjct: 478 RVMDFGSVFLPSPTKGDTAVAAAATP-------GANIAELIISRGLGTVVRHRDFEERSN 530

Query: 536 YYDALLTAESRALSGRKGIHSAKDPPVMHITDLTTTSAKKAKDFLPFLHRSRRVPAVVEY 595
           +YDALL AE+RA++G+K IHSAKD P +HI DLT  SAKKAKDFLP L R  ++ AVVEY
Sbjct: 531 HYDALLAAEARAIAGKKNIHSAKDSPALHIADLTVASAKKAKDFLPSLQRINQISAVVEY 590

Query: 596 VLSGHRFKLLIPKETCSIAFALSGVRCPGRGEPYSEEAIALMRRKIMQRDVEIEVETVDR 655
           VLSGHRFKL IPKE+CSIAFA SGVRCPGRGEPYSEEAIALMRRKIMQRDVEI VE VDR
Sbjct: 591 VLSGHRFKLYIPKESCSIAFAFSGVRCPGRGEPYSEEAIALMRRKIMQRDVEIVVENVDR 650

Query: 656 NGTFLGSLWE--SRTNVALTLLEAGLAKLQTSFGSDRIPEFHLLDRAEQSAKKQKLKIWE 713
            GTFLGS+WE  S+TN    LLEAGLAK+QT FG+DRIPE H+L+ AE+SAK QKLKIWE
Sbjct: 651 TGTFLGSMWEKNSKTNAGTYLLEAGLAKMQTGFGADRIPEAHILEMAERSAKNQKLKIWE 710

Query: 714 NFVEGEEVSNGAN-VESKQQEVLKVIVTEVLGGGKFYVQTVGDQKIASIQQQLAALNLKE 772
           N+VEGEEV NG++ VE++Q+E LKV+VTEVLGGG+FYVQTVGDQK+ASIQ QLAAL+LK+
Sbjct: 711 NYVEGEEVVNGSSKVETRQKETLKVVVTEVLGGGRFYVQTVGDQKVASIQNQLAALSLKD 770

Query: 773 APVLGAFSPKKGDIVLCYFHADKSWYRAMVVNTPRGPVESPEDIFEVFYIDYGNQEQVAY 832
           AP++G+F+PKKGDIVL  F  D SW RAM+VN PRG V+SPE+ FEVFYIDYGNQE V Y
Sbjct: 771 APIIGSFNPKKGDIVLAQFSLDNSWNRAMIVNGPRGAVQSPEEEFEVFYIDYGNQEIVPY 830

Query: 833 SQLRPLDPSVSAAPGLAQLCSLAYIKSPNVEEDFGQEAAEYLCELTLNSGKEFRAQVEER 892
           S +RP+DPSVS+APGLAQLC LAYIK P  EEDFG++A EYL  +TL SGKEFRA VEER
Sbjct: 831 SAIRPVDPSVSSAPGLAQLCRLAYIKVPGKEEDFGRDAGEYLHTVTLESGKEFRAVVEER 890

Query: 893 DTSGGKLKGQGTGTILAVTLVAVDAEISVNAAMLQEGLARMEKRNRWDRKERKVGLDSLE 952
           DTSGGK+KGQGTGT L VTL+AVD EISVNAAMLQEG+ARMEKR RW+ K+++  LD+LE
Sbjct: 891 DTSGGKVKGQGTGTELVVTLIAVDDEISVNAAMLQEGIARMEKRRRWEPKDKQAALDALE 950

Query: 953 KFQDDARKERRGMWQYGDVESDDEDN 978
           KFQD+ARK R G+W+YGD++SDDEDN
Sbjct: 951 KFQDEARKSRTGIWEYGDIQSDDEDN 976