Miyakogusa Predicted Gene

chr1.CM0088.100.nd
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr1.CM0088.100.nd
         (2441 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AV422326  MWM012e04_r                                                 957   0.0  
AV414911  MWM250c01_r                                                  48   2e-05

>AV422326  MWM012e04_r;
          Length = 483

 Score =  957 bits (483), Expect = 0.0
 Identities = 483/483 (100%)
 Strand = Plus / Plus

                                                                       
Query: 418 gcaagacagaaacgctgtatcaatatagccacttccaacttctactttgtgcttctgaga 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gcaagacagaaacgctgtatcaatatagccacttccaacttctactttgtgcttctgaga 60

                                                                       
Query: 478 tcagtttacaacgtgggaatcacatgagctgtatcacccatgccaaaaaggcttctcaac 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tcagtttacaacgtgggaatcacatgagctgtatcacccatgccaaaaaggcttctcaac 120

                                                                       
Query: 538 ttgtgcttcctgatgattatatattctttgcacatctactattgtgccgtgtttatgcca 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgtgcttcctgatgattatatattctttgcacatctactattgtgccgtgtttatgcca 180

                                                                       
Query: 598 tgaaaggtgatcgtctaaattttcagaaagagtatataaggtgcttcgagctgaagacag 657
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaaaggtgatcgtctaaattttcagaaagagtatataaggtgcttcgagctgaagacag 240

                                                                       
Query: 658 attgtcatattggttggatctgtctcaaacttatggaatgtcaatatgaaatgctaatca 717
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attgtcatattggttggatctgtctcaaacttatggaatgtcaatatgaaatgctaatca 300

                                                                       
Query: 718 attcaaatttcatggacttaagcattgaagaatgcattgaaaagggtgggaatagatgga 777
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attcaaatttcatggacttaagcattgaagaatgcattgaaaagggtgggaatagatgga 360

                                                                       
Query: 778 tggctgtgtataacctggtgaaaggtatggtttccttgcagaggagggatttactctcag 837
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggctgtgtataacctggtgaaaggtatggtttccttgcagaggagggatttactctcag 420

                                                                       
Query: 838 cagaagagttcatggcacaggcttgttcattggttggttttgatagcagcgtctttctat 897
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagaagagttcatggcacaggcttgttcattggttggttttgatagcagcgtctttctat 480

              
Query: 898 gtc 900
           |||
Sbjct: 481 gtc 483


>AV414911  MWM250c01_r;
          Length = 392

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 2297 tgaaaacatgtttggttgacatttagaaaatgttttcttataaaatat 2344
            |||||| |||||||||| |  ||| ||||||||||||||| |||||||
Sbjct: 184  tgaaaatatgtttggttaattttttgaaaatgttttcttagaaaatat 137