Miyakogusa Predicted Gene
- chr1.CM0029.50.nc
BLASTN 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= chr1.CM0029.50.nc
(4819 letters)
Database: lotus_EST_unigene
20,423 sequences; 9,996,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP063723 GENLf026f10 537 e-152
BP058471 GENf004c06 84 3e-15
AV776522 MPD100e01_f 66 7e-10
KMC005993A_C01 KMC005993A_c01 64 3e-09
KMC002184A_C01 KMC002184A_c01 58 2e-07
BP073030 GNf077a08 54 3e-06
>BP063723 GENLf026f10;
Length = 479
Score = 537 bits (271), Expect = e-152
Identities = 335/361 (92%)
Strand = Plus / Minus
Query: 4336 tgttgcaaacccaagctccaggcccaggtttggcaacgtctatgctaggaggcccaagcc 4395
|||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 361 tgttgccaaccccagctccaggcccaggtttggcgacgtctatgctaggaggcccaagcc 302
Query: 4396 acagctggaggccaacattctagaagcttaggatcccaaaataaccaccacctggtgagg 4455
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 acagctggaggccaacattctagaagcttaggatccccaaataaccaccacctggtgagg 242
Query: 4456 tggcagattctcaatgataaggaggggaccagtactattagctaaggatatatatgttaa 4515
|| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 241 tgccagattctcaatgataaggaggggacccgtactattagctaaggatatatatgttag 182
Query: 4516 tatnnnnnnnnnnnnnngtaggcagaaattggctaggacttgggagagatagagcactct 4575
||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatagagagagagagaagtagccagaaattggctaggacttgggagagatagagcactct 122
Query: 4576 cgaatttgctcttgttcattttcttcttcatttgctttcctttgtattactgcaaacact 4635
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 121 cgaatttgctcttgttcattttcttcttcatttgctttcctttgtattactgccaaccct 62
Query: 4636 gcttctgggttcataccagaggattcagtgctaatctagtatactcagtctctattttcc 4695
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61 gcttctgggttcatacccgaggattcagtgctaatctagtatactccgtctctattttcc 2
Query: 4696 t 4696
|
Sbjct: 1 t 1
>BP058471 GENf004c06;
Length = 350
Score = 83.8 bits (42), Expect = 3e-15
Identities = 119/144 (82%), Gaps = 13/144 (9%)
Strand = Plus / Minus
Query: 4553 acttgggagagatagagcactctcgaatttgctcttgttcattttcttcttcatttgctt 4612
|||||||||||| |||||||||||||| |||||||||||||||| |||||
Sbjct: 131 acttgggagagagagagcactctcgaaattgctcttgttcattt-------cattt---- 83
Query: 4613 tcctttgtattactgcaaacactgcttctgggttcataccagaggattcagtgctaatct 4672
|||||||| ||||||| || ||||||||||| |||| |||||||||||||||||| | |
Sbjct: 82 -cctttgtactactgcatac-ctgcttctgggctcattccagaggattcagtgctatttt 25
Query: 4673 agtatactcagtctctattttcct 4696
|||||| || || ||||||||||
Sbjct: 24 agtataatccgttcctattttcct 1
>AV776522 MPD100e01_f;
Length = 417
Score = 65.9 bits (33), Expect = 7e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 4549 taggacttgggagagatagagcactctcgaatttgctcttg 4589
|||||||||||||||| |||||||||||||| |||||||||
Sbjct: 146 taggacttgggagagaaagagcactctcgaaattgctcttg 106
>KMC005993A_C01 KMC005993A_c01;
Length = 539
Score = 63.9 bits (32), Expect = 3e-09
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 4555 ttgggagagatagagcactctcgaatttgctc 4586
||||||||||||||||||||||||||||||||
Sbjct: 110 ttgggagagatagagcactctcgaatttgctc 79
>KMC002184A_C01 KMC002184A_c01;
Length = 979
Score = 58.0 bits (29), Expect = 2e-07
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 1676 tagcggatttttggctcaccgcgatggtccgcattcgcgatttgacaacactg 1728
||||||||||| | ||||||||||| ||||| |||||||||||||||||||
Sbjct: 58 tagcggattttggcctcaccgcgattttccgcgatcgcgatttgacaacactg 6
>BP073030 GNf077a08;
Length = 333
Score = 54.0 bits (27), Expect = 3e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 993 gggatttcatttttgggggtcatccgcgaca 1023
||||||||||||| |||||||||||||||||
Sbjct: 103 gggatttcattttagggggtcatccgcgaca 73