Miyakogusa Predicted Gene

chr6.LjT36L14.10.nd
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr6.LjT36L14.10.nd
         (5845 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

R_KMC000740A_C01 R_KMC000740A_c01                                     139   2e-32

>R_KMC000740A_C01 R_KMC000740A_c01
          Length = 615

 Score =  139 bits (70), Expect = 2e-32
 Identities = 118/134 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1519 catggatttgctagaaatcggttctggaccattgacaatgacccttcacctttttcaacc 1578
            ||||| ||||||||||| ||||||||||| ||||||||||||||| | |||||| |||| 
Sbjct: 258  catgggtttgctagaaaccggttctggacaattgacaatgaccctcctccttttccaaca 317

                                                                        
Query: 1579 aatactttgaacaaagcctttgttgatttgattctcaagccctctgaagaagacatgaag 1638
            ||| ||| | | | ||||||||||||||||||||| || ||||| ||||| |||||||||
Sbjct: 318  aatgcttcggagacagcctttgttgatttgattcttaaaccctcagaagatgacatgaag 377

                          
Query: 1639 atttggcctcacag 1652
            ||||||||||||||
Sbjct: 378  atttggcctcacag 391



 Score =  111 bits (56), Expect = 5e-24
 Identities = 107/124 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1814 gggtagctttgggacctggaggagatctgatgttgacatctcgggttcggaacacaagca 1873
            |||||||  ||||||||||||||||||| ||  ||| ||||||| || ||||||||| ||
Sbjct: 409  gggtagccctgggacctggaggagatctaatactgaaatctcggattaggaacacaaaca 468

                                                                        
Query: 1874 gtgatgggaagccattttcattcactgttgctcatcatacatatttctctgtatcagaca 1933
              || ||| ||||||||||||||||| ||||| ||||||||||||||||||| ||||| |
Sbjct: 469  acgaaggggagccattttcattcacttttgctaatcatacatatttctctgtgtcagata 528

                
Query: 1934 taag 1937
            ||||
Sbjct: 529  taag 532



 Score = 73.8 bits (37), Expect = 1e-12
 Identities = 73/85 (85%)
 Strand = Plus / Plus

                                                                        
Query: 3999 agtgaagttcgggtagagggattagaaaccctggattatcttgacttcttgcagaacaag 4058
            |||| ||||||||||||||||||| | || |||||||||||||||  ||||||||| | |
Sbjct: 531  agtggagttcgggtagagggattaaagacactggattatcttgacaacttgcagaaaatg 590

                                     
Query: 4059 gagcgctttactgaacagggggatg 4083
             | |||||||| ||||| |||||||
Sbjct: 591  aaacgctttacagaacatggggatg 615



 Score = 60.0 bits (30), Expect = 2e-08
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 513 cctccaaaggcaattcgtggagggattccgatatgctt 550
           ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 186 cctccaaaggcaattcgtggaggaattccaatatgctt 223