Miyakogusa Predicted Gene

chr6.CM0037.310.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr6.CM0037.310.nc
         (1225 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AV409733  MWL061d03_r                                                 373   e-103
AV407119  MWL016h03_r                                                  60   3e-09

>AV409733  MWL061d03_r;
          Length = 217

 Score =  373 bits (188), Expect = e-103
 Identities = 188/188 (100%)
 Strand = Plus / Plus

                                                                       
Query: 530 gcagaagaagagacagaaatatccaacaacaacccttttcacagagtgttgtgatatgca 589
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30  gcagaagaagagacagaaatatccaacaacaacccttttcacagagtgttgtgatatgca 89

                                                                       
Query: 590 gcaaggtgatcaaactgtccttagcttgaggcctggtggtggacgtggcgctggaaccag 649
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90  gcaaggtgatcaaactgtccttagcttgaggcctggtggtggacgtggcgctggaaccag 149

                                                                       
Query: 650 gcttctctcatcatctccctccgatcttcctttgttccgctcccatggcgccgctcttgc 709
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 gcttctctcatcatctccctccgatcttcctttgttccgctcccatggcgccgctcttgc 209

                   
Query: 710 ttctttct 717
           ||||||||
Sbjct: 210 ttctttct 217


>AV407119  MWL016h03_r;
          Length = 266

 Score = 60.0 bits (30), Expect = 3e-09
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 584 tatgcagcaaggtgatcaaactgtccttagcttgaggcctgg 625
           ||||||||||||||||||||| || || ||||||||||||||
Sbjct: 223 tatgcagcaaggtgatcaaaccgttctcagcttgaggcctgg 264