Miyakogusa Predicted Gene
- chr5.LjT43D06.200.nd
BLASTN 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= chr5.LjT43D06.200.nd
(1657 letters)
Database: lotus_5dash_unigene
7353 sequences; 3,026,947 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
R_KMC001127A_C01 R_KMC001127A_c01 906 0.0
R_KMC000473A_C01 R_KMC000473A_c01 172 4e-43
R_KMC001800A_C01 R_KMC001800A_c01 54 3e-07
>R_KMC001127A_C01 R_KMC001127A_c01
Length = 524
Score = 906 bits (457), Expect = 0.0
Identities = 501/523 (95%)
Strand = Plus / Plus
Query: 486 agaaaacacataaccatggccaccctctactcaaatccttcaactctgaaagttgtttta 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agaaaacacataaccatggccaccctctactcaaatccttcaactctgaaagttgtttta 61
Query: 546 gcaagtttgcttctcttgctaaccattaaggtgaactcagtagaaggagtttccttcaac 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gcaagtttgcttctcttgctaaccattaaggtgaactcagtagaaggagtttccttcaac 121
Query: 606 ttcaccaagttcactgatgatggtagtctaattctccaaggtgatgccaagatttggact 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttcaccaagttcactgatgatggtagtctaattctccaaggtgatgccaagatttggact 181
Query: 666 gatgggaggttggccctgccctctgatccattgattggcaagactacaagccgagtcttg 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gatgggaggttggccctgccctctgatccattgattggcaagactacaagccgagtcttg 241
Query: 726 tatgcaacaccggtgcccatttgggattcaaccacgggcagtgttgcaagctttgtttct 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tatgcaacaccggtgcccatttgggattcaaccacgggcagtgttgcaagctttgtttct 301
Query: 786 tccttctcttttgttgtgagtgatgtccccggttataaaatatctgatggacttgnnnnn 845
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tccttctcttttgttgtgagtgatgtccccggttataaaatatctgatggacttgttttt 361
Query: 846 nnncttgcaccgtgggggactacaatnnnnnnnaattcagaaggtaagaatcttggaatc 905
||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 362 tttcttgcaccgtgggggactacaatcccccccaattcagaaggtaagaatcttggaatc 421
Query: 906 cttgatgnnnnnnntggttacaatcaatttgttgctgtagaatttgattcttacaacaat 965
||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cttgatgaaaaaaatggttacaatcaatttgttgctgtagaatttgattcttacaacaat 481
Query: 966 acaagggacccaacatttagacatatcggaattgatgtcaact 1008
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 acaagggacccaacatttagacatatcggaattgatgtcaact 524
>R_KMC000473A_C01 R_KMC000473A_c01
Length = 494
Score = 172 bits (87), Expect = 4e-43
Identities = 234/283 (82%)
Strand = Plus / Plus
Query: 499 ccatggccaccctctactcaaatccttcaactctgaaagttgttttagcaagtttgcttc 558
|||||||||| | |||||||||| |||| |||| || || |||||||| |||| ||
Sbjct: 27 ccatggccactccctactcaaatgcttccactcaaaattttcttttagcatgtttatttt 86
Query: 559 tcttgctaaccattaaggtgaactcagtagaaggagtttccttcaacttcaccaagttca 618
|||||||| |||| || ||||||| || || || | ||||||||||||||||| ||||||
Sbjct: 87 tcttgctagccatcaatgtgaacttagcagcagcaatttccttcaacttcaccgagttca 146
Query: 619 ctgatgatggtagtctaattctccaaggtgatgccaagatttggactgatgggaggttgg 678
|||||||||| ||||||||| | ||||||||||||||||||||| | |||||||| ||||
Sbjct: 147 ctgatgatgggagtctaattattcaaggtgatgccaagatttgggcagatgggagcttgg 206
Query: 679 ccctgccctctgatccattgattggcaagactacaagccgagtcttgtatgcaacaccgg 738
| || ||| | || |||| |||| |||||||| || | ||||| |||||||| |
Sbjct: 207 ctctacccaccgacccatcagttggtttcactacaagtcgtgctttgtacgcaacaccag 266
Query: 739 tgcccatttgggattcaaccacgggcagtgttgcaagctttgt 781
|||||||||||||||| ||||| |||| |||||||||||||||
Sbjct: 267 tgcccatttgggattctaccactggcaatgttgcaagctttgt 309
>R_KMC001800A_C01 R_KMC001800A_c01
Length = 419
Score = 54.0 bits (27), Expect = 3e-07
Identities = 50/55 (90%), Gaps = 2/55 (3%)
Strand = Plus / Minus
Query: 1153 tgatttgaaagttgtgcttccaaaggaggt-agtgtt-gttttagcgcaaccacg 1205
|||||||||||||||||||||| ||||||| |||||| | ||||| |||||||||
Sbjct: 371 tgatttgaaagttgtgcttccagaggaggtcagtgttggctttagtgcaaccacg 317