Miyakogusa Predicted Gene
- chr5.LjT17N18.130.nd
BLASTN 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= chr5.LjT17N18.130.nd
(17,137 letters)
Database: lotus_5dash_unigene
7353 sequences; 3,026,947 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
R_KMC000932A_C01 R_KMC000932A_c01 547 e-155
AV412624 MWM221h12_r 285 4e-76
AV414052 MWM239h09_r 52 1e-05
AV428616 MWL003a07_r 48 2e-04
R_KMC002159A_C01 R_KMC002159A_c01 48 2e-04
>R_KMC000932A_C01 R_KMC000932A_c01
Length = 522
Score = 547 bits (276), Expect = e-155
Identities = 276/276 (100%)
Strand = Plus / Plus
Query: 428 ttgctagggttcttcttctttttctctcttcgttcaattcaattttgctgcaaactgaag 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 ttgctagggttcttcttctttttctctcttcgttcaattcaattttgctgcaaactgaag 274
Query: 488 aagacatcgatcgatggggtcgaaaccgtggctgcatcctgctcctccttaccgaccact 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aagacatcgatcgatggggtcgaaaccgtggctgcatcctgctcctccttaccgaccact 334
Query: 548 tgaatcgcactgggacaccgatgaagacgatcctggtcctcgctgtggtcacacgctcac 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgaatcgcactgggacaccgatgaagacgatcctggtcctcgctgtggtcacacgctcac 394
Query: 608 tgctgtagccgccaccaagtcgcgcggtccgcgcttaatcctcttcggcggcgccaccgc 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tgctgtagccgccaccaagtcgcgcggtccgcgcttaatcctcttcggcggcgccaccgc 454
Query: 668 cattgaaggaggatctacttcagctcccggcattcg 703
||||||||||||||||||||||||||||||||||||
Sbjct: 455 cattgaaggaggatctacttcagctcccggcattcg 490
Score = 115 bits (58), Expect = 9e-25
Identities = 140/181 (77%)
Strand = Plus / Plus
Query: 214 atacaatacaaccatgaatcaaaaccccaactctttcaatccaaatccaattcannnnnn 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atacaatacaaccatgaatcaaaaccccaactctttcaatccaaatccaattcatcttct 60
Query: 274 nnnnnnnnnnnaatcactctctacaaattttctggtctaagttnnnnnnnnnnnnnnnnn 333
||||||||||||||||||||||||||||||||
Sbjct: 61 tcttcttcttcaatcactctctacaaattttctggtctaagttaacaaacaaacaacaca 120
Query: 334 nnnnnnngttgtacaataccaccattcaattcaattcagcgggtccggtgcttctccggg 393
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acacacagttgtacaataccaccattcaattcaattcagcgggtccggtgcttctccggg 180
Query: 394 c 394
|
Sbjct: 181 c 181
Score = 65.9 bits (33), Expect = 7e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 784 gattggctggagtaacgaattccgtgcattctt 816
|||||||||||||||||||||||||||||||||
Sbjct: 490 gattggctggagtaacgaattccgtgcattctt 522
>AV412624 MWM221h12_r;
Length = 400
Score = 285 bits (144), Expect = 4e-76
Identities = 195/211 (92%), Gaps = 7/211 (3%)
Strand = Plus / Minus
Query: 6506 tgagctagcttttgtggttgagtataggcctcccaatttctaatatggtatcagagccta 6565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tgagctagcttttgtggttgagtataggcctcccaatttctaatatggtatcagagccta 310
Query: 6566 tcctagatccatttgttgtttgtggagacttctcatatttggggcacccgttgttgttga 6625
||||||||||||||||||| |||||| | |||||||||| |||||||||||| |
Sbjct: 309 tcctagatccatttgttgt----ggagaccacccatatttgggtcacccgttgttg---a 257
Query: 6626 tcccacgttccaggttgttcagtcctggacgtgaggaggtgtgttagaagtcccacattg 6685
||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 256 tcccacgttccagtctgttcaatcctggacgtgagggggtgtgttagaagtcccacattg 197
Query: 6686 gctagagatagagcatagatagcctttataa 6716
|||||||||||||||||||||| ||||||||
Sbjct: 196 gctagagatagagcatagatagtctttataa 166
Score = 91.7 bits (46), Expect = 1e-17
Identities = 49/50 (98%)
Strand = Plus / Minus
Query: 6449 tgttagaagtcccacattggctagagatagagcatagatagcctttataa 6498
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 215 tgttagaagtcccacattggctagagatagagcatagatagtctttataa 166
>AV414052 MWM239h09_r;
Length = 428
Score = 52.0 bits (26), Expect = 1e-05
Identities = 69/82 (84%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 2402 aaccgttgatttctcaatcaacaattgtgatgccctaatttatccttttaatgtgactct 2461
||||||||||| ||||||| ||||||||| | || |||| |||| ||| ||||||||
Sbjct: 239 aaccgttgattgagaaatcaacgattgtgatgacttatttta-ccttctaaagtgactct 297
Query: 2462 ttcactttagatgagtcaaatc 2483
|||||||||| ||||||||||
Sbjct: 298 ctcactttagaggagtcaaatc 319
>AV428616 MWL003a07_r;
Length = 382
Score = 48.1 bits (24), Expect = 2e-04
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 5655 ggtatttcagggtttttgcttccaacacatactgaaaatggtctagttttaggagaatga 5714
||||||| |||||| ||| ||| | ||||| || |||||||||||||| | ||| ||||
Sbjct: 272 ggtattttagggttattgtttcggaaacataatgtaaatggtctagtttaaagaggatga 213
Query: 5715 ggaggaag 5722
||||||||
Sbjct: 212 ggaggaag 205
>R_KMC002159A_C01 R_KMC002159A_c01
Length = 438
Score = 48.1 bits (24), Expect = 2e-04
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 13036 tacttgtttttgggagattatgttgatcgagg 13067
|||||||||||||| |||||||| ||||||||
Sbjct: 392 tacttgtttttgggggattatgtggatcgagg 423