Miyakogusa Predicted Gene

chr5.CM1439.180.nd
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr5.CM1439.180.nd
         (6006 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

R_KMC000843A_C01 R_KMC000843A_c01                                     216   1e-55
R_KMC002238A_C01 R_KMC002238A_c01                                      44   0.001

>R_KMC000843A_C01 R_KMC000843A_c01
          Length = 446

 Score =  216 bits (109), Expect = 1e-55
 Identities = 109/109 (100%)
 Strand = Plus / Plus

                                                                       
Query: 573 cagccaactggatctgcacccaaccctcgccagccttccagaacccctttctccaatctc 632
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 cagccaactggatctgcacccaaccctcgccagccttccagaacccctttctccaatctc 283

                                                            
Query: 633 agccaggtcgacgctgacctcgccctcgctcgaacccttcaggagcagg 681
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 agccaggtcgacgctgacctcgccctcgctcgaacccttcaggagcagg 332



 Score =  157 bits (79), Expect = 9e-38
 Identities = 79/79 (100%)
 Strand = Plus / Plus

                                                                       
Query: 427 gttcaggagaagttgtgaaatccaccaaccacaaccatgaagaagagcattccaattcca 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78  gttcaggagaagttgtgaaatccaccaaccacaaccatgaagaagagcattccaattcca 137

                              
Query: 487 atggcgaggagcacatgac 505
           |||||||||||||||||||
Sbjct: 138 atggcgaggagcacatgac 156



 Score =  155 bits (78), Expect = 4e-37
 Identities = 78/78 (100%)
 Strand = Plus / Plus

                                                                        
Query: 928  aggaaagggcatacatgatgctgagaatgaataatgatggaagtgactatggaagttggg 987
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330  aggaaagggcatacatgatgctgagaatgaataatgatggaagtgactatggaagttggg 389

                              
Query: 988  agggtggaagctatttgc 1005
            ||||||||||||||||||
Sbjct: 390  agggtggaagctatttgc 407


>R_KMC002238A_C01 R_KMC002238A_c01
          Length = 500

 Score = 44.1 bits (22), Expect = 0.001
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 470 agagcattccaattccaatggc 491
           ||||||||||||||||||||||
Sbjct: 86  agagcattccaattccaatggc 107