Miyakogusa Predicted Gene
- chr5.CM0357.270.nc
BLASTN 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= chr5.CM0357.270.nc
(2694 letters)
Database: lotus_5dash_unigene
7353 sequences; 3,026,947 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
R_KMC000660A_C01 R_KMC000660A_c01 511 e-145
R_KMC001862A_C01 R_KMC001862A_c01 196 5e-50
AV429241 MWM193e05_r 54 4e-07
>R_KMC000660A_C01 R_KMC000660A_c01
Length = 458
Score = 511 bits (258), Expect = e-145
Identities = 258/258 (100%)
Strand = Plus / Plus
Query: 444 gcaaaaccatatttcgttcctttcatcttcgctttctatttcaacgatccacgaaaaatg 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gcaaaaccatatttcgttcctttcatcttcgctttctatttcaacgatccacgaaaaatg 62
Query: 504 ctggcggttttcgacaaatcggtggcaaagggtcctgaggcactgcaaagccctcagtca 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ctggcggttttcgacaaatcggtggcaaagggtcctgaggcactgcaaagccctcagtca 122
Query: 564 aactccgtgtcagcgctgaaagatgggtttttggcgcagcacttctcctctgtttaccct 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 aactccgtgtcagcgctgaaagatgggtttttggcgcagcacttctcctctgtttaccct 182
Query: 624 ggttccgtcatcgtcaaccttggcacttctggtaccttggcctattctcttcacaaacag 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ggttccgtcatcgtcaaccttggcacttctggtaccttggcctattctcttcacaaacag 242
Query: 684 aaccctctccttccaagg 701
||||||||||||||||||
Sbjct: 243 aaccctctccttccaagg 260
Score = 398 bits (201), Expect = e-111
Identities = 201/201 (100%)
Strand = Plus / Plus
Query: 1244 aggctgtttgcggttgtggatgacatcttctgcttgtttcaaggccacattcagaatgtt 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aggctgtttgcggttgtggatgacatcttctgcttgtttcaaggccacattcagaatgtt 317
Query: 1304 gcccatcttaagcaacagtatggattgaataaaacagcaaatgaagtgatcattgtcata 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gcccatcttaagcaacagtatggattgaataaaacagcaaatgaagtgatcattgtcata 377
Query: 1364 gaggcatacaggactctaagagatcgcggtccctatcctgctgctcaggttgtgagagat 1423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gaggcatacaggactctaagagatcgcggtccctatcctgctgctcaggttgtgagagat 437
Query: 1424 ttccaaggcaaatttacattt 1444
|||||||||||||||||||||
Sbjct: 438 ttccaaggcaaatttacattt 458
>R_KMC001862A_C01 R_KMC001862A_c01
Length = 422
Score = 196 bits (99), Expect = 5e-50
Identities = 147/163 (90%)
Strand = Plus / Plus
Query: 1244 aggctgtttgcggttgtggatgacatcttctgcttgtttcaaggccacattcagaatgtt 1303
||||| ||||| || |||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 256 aggctatttgcagtggtggatgacatcttctgcttgtttcaaggccacattgacaatgtt 315
Query: 1304 gcccatcttaagcaacagtatggattgaataaaacagcaaatgaagtgatcattgtcata 1363
|| ||||||||||| || || |||||||| |||||||||||||| |||||||||||||||
Sbjct: 316 gctcatcttaagcagcaatacggattgaacaaaacagcaaatgaggtgatcattgtcata 375
Query: 1364 gaggcatacaggactctaagagatcgcggtccctatcctgctg 1406
||||| |||||||| ||| ||||||| |||||||| |||||||
Sbjct: 376 gaggcttacaggacactacgagatcgaggtccctaccctgctg 418
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 582 aaagatgggtttttggcgcagcacttctcctctgtttaccct 623
||||||||||||||||| | |||||| ||||||||||||||
Sbjct: 139 aaagatgggtttttggccaaacacttcacctctgtttaccct 180
>AV429241 MWM193e05_r;
Length = 109
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/62 (91%), Gaps = 5/62 (8%)
Strand = Plus / Plus
Query: 643 ttggcacttctg--gtacctt-ggcctattctcttcaca-aacaga-accctctccttcc 697
|||||||||||| ||||||| ||||||||||||||||| |||||| |||||||||||||
Sbjct: 10 ttggcacttctgnngtacctttggcctattctcttcacanaacagataccctctccttcc 69
Query: 698 aa 699
||
Sbjct: 70 aa 71