Miyakogusa Predicted Gene

chr5.CM0052.430.nd
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr5.CM0052.430.nd
         (1621 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

R_KMC000189A_C01 R_KMC000189A_c01                                     963   0.0  

>R_KMC000189A_C01 R_KMC000189A_c01
          Length = 971

 Score =  963 bits (486), Expect = 0.0
 Identities = 507/515 (98%), Gaps = 1/515 (0%)
 Strand = Plus / Plus

                                                                        
Query: 501  tcagggggaccagactatgaactccccttaggaaggagagatggattaaacttcgccaca 560
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457  tcagggggaccagactatgaactccccttaggaaggagagatggattaaacttcgccaca 516

                                                                        
Query: 561  aggaatgtcaccttggataacctcccagcaccccaaagcaacaccaccaccatcctcaac 620
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517  aggaatgtcaccttggataacctcccagcaccccaaagcaacaccaccaccatcctcaac 576

                                                                        
Query: 621  tcactcgccaccaaaaacctcgacccgaccgacgtggtatccctctctggcggccacacc 680
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577  tcactcgccaccaaaaacctcgacccgaccgacgtggtatccctctctggcggccacacc 636

                                                                        
Query: 681  atcggcatcagccactgctcttccttcaccgaccgcctctacccatccaaagaccccgtc 740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637  atcggcatcagccactgctcttccttcaccgaccgcctctacccatccaaagaccccgtc 696

                                                                        
Query: 741  atggaccaaaccttcgnnnnnnntctcaagctcacctgccccgccagtaacacggacaac 800
            ||||||||||||||||       |||||||||||||||||||||||||||||||||||||
Sbjct: 697  atggaccaaaccttcgaaaaaaatctcaagctcacctgccccgccagtaacacggacaac 756

                                                                        
Query: 801  accaccgtgctggaccttcgcagccccaacacgttcgacaacaagtactacgtcgacctc 860
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757  accaccgtgctggaccttcgcagccccaacacgttcgacaacaagtactacgtcgacctc 816

                                                                        
Query: 861  atgaaccgccagggtctcttcttctccgaccaggacttgtacactgacaagaggaccaag 920
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817  atgaaccgccagggtctcttcttctccgaccaggacttgtacactgacaagaggaccaag 876

                                                                        
Query: 921  gacattgttaccagctttgcagtgaaccagagtttgtttttcgagaagtttgtggtggcg 980
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877  gacattgttaccagctttgcagtgaaccagagtttgtttttcgagaagtttgtggtggcg 936

                                               
Query: 981  atg-ctaaagatggggcagctgaacgtgttgacag 1014
            ||| |||||||||||||||||||||||||||||||
Sbjct: 937  atgcctaaagatggggcagctgaacgtgttgacag 971