Miyakogusa Predicted Gene

chr5.CM0052.230.nd
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr5.CM0052.230.nd
         (6853 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AV417330  MWM142f02_r                                                 662   0.0  

>AV417330  MWM142f02_r;
          Length = 334

 Score =  662 bits (334), Expect = 0.0
 Identities = 334/334 (100%)
 Strand = Plus / Minus

                                                                        
Query: 6182 tgaggagcacggaaccattgtcaactgcaaagtgtttgagatgaatcagaagaaacaggc 6241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334  tgaggagcacggaaccattgtcaactgcaaagtgtttgagatgaatcagaagaaacaggc 275

                                                                        
Query: 6242 tctggttcagtttgagactgaggagcaggctactgaagccctcgtgtgcaagcatgccac 6301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274  tctggttcagtttgagactgaggagcaggctactgaagccctcgtgtgcaagcatgccac 215

                                                                        
Query: 6302 ctcgctttctggctcagtgatccggatctccttttcccagttacagaacatttgagactt 6361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214  ctcgctttctggctcagtgatccggatctccttttcccagttacagaacatttgagactt 155

                                                                        
Query: 6362 tgtttaaaggaccagtggattgttaagcttattagagacaaggattttgaatttgggaag 6421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154  tgtttaaaggaccagtggattgttaagcttattagagacaaggattttgaatttgggaag 95

                                                                        
Query: 6422 aattttcttttatgcagatgatggtcttcttcattatcttgtaatagtttctttactttc 6481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94   aattttcttttatgcagatgatggtcttcttcattatcttgtaatagtttctttactttc 35

                                              
Query: 6482 tgatttgctgatattaagacatgctatttgactt 6515
            ||||||||||||||||||||||||||||||||||
Sbjct: 34   tgatttgctgatattaagacatgctatttgactt 1