Miyakogusa Predicted Gene

chr4.CM0680.50.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr4.CM0680.50.nc
         (10,377 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

R_KMC001375A_C01 R_KMC001375A_c01                                     155   6e-37
AV429259  MWM197e01_r                                                 133   2e-30

>R_KMC001375A_C01 R_KMC001375A_c01
          Length = 526

 Score =  155 bits (78), Expect = 6e-37
 Identities = 117/130 (90%)
 Strand = Plus / Minus

                                                                        
Query: 8982 tctggacatccagttgtacaagttgcatagtatcataaatagccattatggggattacac 9041
            |||| |||||| ||||||||| ||||||||||||||||||||| |||  ||||||||| |
Sbjct: 308  tctgtacatccggttgtacaaattgcatagtatcataaatagctattccggggattaccc 249

                                                                        
Query: 9042 atcttcccagagaattaataaacagaaacaaatctttgttatcatcctctatactcagat 9101
            ||| |||| ||||||||||||||||| |||||||||| ||||||||||||||||| ||||
Sbjct: 248  atcctcccggagaattaataaacagatacaaatctttcttatcatcctctatactgagat 189

                      
Query: 9102 attccataag 9111
            || |||||||
Sbjct: 188  ataccataag 179


>AV429259  MWM197e01_r;
          Length = 283

 Score =  133 bits (67), Expect = 2e-30
 Identities = 97/107 (90%)
 Strand = Plus / Minus

                                                                        
Query: 9005 tgcatagtatcataaatagccattatggggattacacatcttcccagagaattaataaac 9064
            |||||||||||||||||||| |||  ||||||||| |||| |||| ||||||||||||||
Sbjct: 283  tgcatagtatcataaatagctattccggggattacccatcctcccggagaattaataaac 224

                                                           
Query: 9065 agaaacaaatctttgttatcatcctctatactcagatattccataag 9111
            ||| |||||||||| ||||||||||||||||| |||||| |||||||
Sbjct: 223  agatacaaatctttcttatcatcctctatactgagatataccataag 177