Miyakogusa Predicted Gene

chr4.CM0281.230.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr4.CM0281.230.nc
         (8004 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

R_KMC000846A_C01 R_KMC000846A_c01                                      82   6e-15
AV412230  MWM216a12_r                                                  58   8e-08

>R_KMC000846A_C01 R_KMC000846A_c01
          Length = 430

 Score = 81.8 bits (41), Expect = 6e-15
 Identities = 128/157 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1836 caacaaaatacttcaagctcctttgggtcagttccatcgtacaataaagcaaaccccgac 1895
            ||||||||||| || || |||||||| |||||| | | ||||||||||| ||||| ||| 
Sbjct: 155  caacaaaatacctctagttcctttggatcagttgcgttgtacaataaagtaaaccacgat 214

                                                                        
Query: 1896 catgggttggctaatggaactcttgaagtgcaaaactttgctccgagtgggaactatggt 1955
            ||||| || |||||||||||| |||||    |||  |||| ||| |||||||||   |||
Sbjct: 215  catggttttgctaatggaacttttgaaccaaaaagttttgttcctagtgggaacatcggt 274

                                                 
Query: 1956 caacattttaattattcgaacacacagtttgatgaac 1992
            || || ||||||||||| | |||| ||||||||||||
Sbjct: 275  cagcagtttaattattcaagcacaaagtttgatgaac 311


>AV412230  MWM216a12_r;
          Length = 383

 Score = 58.0 bits (29), Expect = 8e-08
 Identities = 85/101 (84%), Gaps = 2/101 (1%)
 Strand = Plus / Plus

                                                                        
Query: 7153 tgaaaatccgtcaacatcttctaggaatgattgggcatacctatcccccaaaaca-ccat 7211
            |||| |||| ||||||||||| | |||||||||| |||||| | |||||||||||   ||
Sbjct: 8    tgaagatccttcaacatcttccacgaatgattggtcatacc-aacccccaaaacatgtat 66

                                                     
Query: 7212 caccaatggccaggcaaaggtttccaagtatgggtaacatc 7252
            |  || |||||| ||||| ||||||||||||||| ||||||
Sbjct: 67   cggcagtggccatgcaaaagtttccaagtatggggaacatc 107



 Score = 52.0 bits (26), Expect = 5e-06
 Identities = 55/62 (88%), Gaps = 2/62 (3%)
 Strand = Plus / Plus

                                                                        
Query: 7483 agatcttcatgaggttgaactttgagcagataatttaagttgtaaatatc-aaattttgt 7541
            ||||||||| ||||||||||||||||||| | | | ||| |||||||||| |||||||||
Sbjct: 320  agatcttcaagaggttgaactttgagcag-ttactgaagctgtaaatatcaaaattttgt 378

              
Query: 7542 tt 7543
            ||
Sbjct: 379  tt 380