Miyakogusa Predicted Gene

chr4.CM0006.350.nc
Show Alignment: 
BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr4.CM0006.350.nc
         (9893 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

R_KMC002086A_C01 R_KMC002086A_c01                                     129   3e-29

>R_KMC002086A_C01 R_KMC002086A_c01
          Length = 346

 Score =  129 bits (65), Expect = 3e-29
 Identities = 201/246 (81%), Gaps = 6/246 (2%)
 Strand = Plus / Plus

                                                                        
Query: 6244 aattaaatactgaatataaactataagaatgttaaggtaaaacttcgtttgaaacgatgg 6303
            |||||||||  | ||| |||||| || ||||||| |||||||||||||||||||||||| 
Sbjct: 1    aattaaatatcggatagaaactaaaaaaatgttatggtaaaacttcgtttgaaacgatgt 60

                                                                        
Query: 6304 ggtaaaaagcaatgtgccacttgaaggatatgattcggattagccgttgattccgacatc 6363
            |||||||||||| |||| ||||||| ||  |||||||||||||| || ||||| || |||
Sbjct: 61   ggtaaaaagcaacgtgcgacttgaaagacgtgattcggattagctgtggattctgatatc 120

                                                                        
Query: 6364 cgtcannnnnnnnnagtatcagtatatagaaattaggggtgctattggtttgagatcctt 6423
            || ||         ||||| ||||||||||||| || |||||| |||| | || ||| ||
Sbjct: 121  cgcca-ttttttctagtattagtatatagaaatcagaggtgctcttggctcgacatcgtt 179

                                                                        
Query: 6424 tgttctattccacga-aatccattatttggggg----ctgggagaggaatcgatgatgta 6478
            ||||||||||||| | |||||||| ||||||||    || |||||||| | |||||||||
Sbjct: 180  tgttctattccactagaatccattgtttgggggatccctcggagaggatttgatgatgta 239

                  
Query: 6479 aatagt 6484
            ||||||
Sbjct: 240  aatagt 245