Miyakogusa Predicted Gene

chr4.CM0003.160.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr4.CM0003.160.nc
         (7027 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AV408279  MWL038h12_r                                                 371   e-102

>AV408279  MWL038h12_r;
          Length = 279

 Score =  371 bits (187), Expect = e-102
 Identities = 187/187 (100%)
 Strand = Plus / Plus

                                                                       
Query: 230 aggttttcattcattctcgcacttcaccctttccccccttctctctcactctctcatatc 289
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aggttttcattcattctcgcacttcaccctttccccccttctctctcactctctcatatc 60

                                                                       
Query: 290 caaacacacaacgagggtttctcactttctcttctcatcaaactcgttcgcttcttttaa 349
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  caaacacacaacgagggtttctcactttctcttctcatcaaactcgttcgcttcttttaa 120

                                                                       
Query: 350 cttcgattcttctctgaatgtaattcagattcatttcacttcgctcttcggtttttaggg 409
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttcgattcttctctgaatgtaattcagattcatttcacttcgctcttcggtttttaggg 180

                  
Query: 410 ctttgct 416
           |||||||
Sbjct: 181 ctttgct 187



 Score = 77.8 bits (39), Expect = 8e-14
 Identities = 39/39 (100%)
 Strand = Plus / Plus

                                                  
Query: 470 gagatttgtatcttgattgctcgatctcgccatggagaa 508
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagatttgtatcttgattgctcgatctcgccatggagaa 279