Miyakogusa Predicted Gene

chr3.LjT23E22.10.nd
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr3.LjT23E22.10.nd
         (8115 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AV408441  MWL041f05_r                                                 349   2e-95

>AV408441  MWL041f05_r;
          Length = 314

 Score =  349 bits (176), Expect = 2e-95
 Identities = 176/176 (100%)
 Strand = Plus / Plus

                                                                        
Query: 5547 gtagttgttgctgccgagactggtggagccttaggtggtatggttagacaactttcaatt 5606
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26   gtagttgttgctgccgagactggtggagccttaggtggtatggttagacaactttcaatt 85

                                                                        
Query: 5607 gatcaatttgaaaatgaaggcaggcgtgtcagttatgggactccggaaaatgcaactgct 5666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86   gatcaatttgaaaatgaaggcaggcgtgtcagttatgggactccggaaaatgcaactgct 145

                                                                    
Query: 5667 gctagaaaattgttagatcggcagatgtcaatcaatagtgtgcccaaaaaggtcat 5722
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146  gctagaaaattgttagatcggcagatgtcaatcaatagtgtgcccaaaaaggtcat 201



 Score =  238 bits (120), Expect = 4e-62
 Identities = 120/120 (100%)
 Strand = Plus / Plus

                                                                        
Query: 6152 aggtcatagcacacctcttaaagcctcgtggatggaaaccaccagtacgccgacagtttt 6211
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195  aggtcatagcacacctcttaaagcctcgtggatggaaaccaccagtacgccgacagtttt 254

                                                                        
Query: 6212 tcttagattgtaatgaaattgctgatctctgtgatagtgctgagcggatattttcaacag 6271
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255  tcttagattgtaatgaaattgctgatctctgtgatagtgctgagcggatattttcaacag 314



 Score = 54.0 bits (27), Expect = 1e-06
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                       
Query: 3200 tggagttcggctgcatcacagagctgt 3226
            |||||||||||||||||||||||||||
Sbjct: 1    tggagttcggctgcatcacagagctgt 27