Miyakogusa Predicted Gene

chr3.CM0634.370.nd
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr3.CM0634.370.nd
         (5837 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AV419558  MWM171g12_r                                                 375   e-103

>AV419558  MWM171g12_r;
          Length = 397

 Score =  375 bits (189), Expect = e-103
 Identities = 312/353 (88%)
 Strand = Plus / Plus

                                                                        
Query: 2323 agaatgactggagcgttgttaaacgagggtgggatgctcaagttcttggtgaagcctctc 2382
            ||||||||||||  ||||| |||||||||||| |||| |||||||| ||||||||  || 
Sbjct: 45   agaatgactggaatgttgtgaaacgagggtggaatgcgcaagttctcggtgaagcgcctt 104

                                                                        
Query: 2383 ataagtttactagtgctcttgaagctgtcaagacactgagggcagaaccaaaagccaatg 2442
            |||||||||| | |||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 105  ataagtttacaactgctcttgaagctgtcaagaaactgagggcagaaccaaaggccaatg 164

                                                                        
Query: 2443 accagtatcttcctccttttgttatcattgatgagagtgggaagcctgttggcccaatag 2502
            |||||||||| ||||| ||||||||  |||||||||  ||||| ||||| || || ||||
Sbjct: 165  accagtatctgcctccctttgttattgttgatgagaacgggaaacctgtcggtccgatag 224

                                                                        
Query: 2503 ttgatggagatgctgttgttacattgaacttccgagcagatcgtatggttatgattgcta 2562
            ||||||| ||||| |||||||| || |||||||| |||||||| |||  |||| ||||||
Sbjct: 225  ttgatggcgatgcggttgttacgttcaacttccgggcagatcgaatgactatgcttgcta 284

                                                                        
Query: 2563 aagctcttgaatatgaaaattttgacaaatttgacagagttcgtgtccctaagattcact 2622
            | ||||||||||||||||||||||||||||| ||||| ||||||  |||||| || ||||
Sbjct: 285  aggctcttgaatatgaaaattttgacaaattcgacagggttcgtcaccctaaaatccact 344

                                                                 
Query: 2623 atgctggaatgcttgaatatgatggtgaattgaagcttccaaggcattacctt 2675
            ||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 345  atgctggaatgcttgaatacgatggtgaattgaagcttccaagtcattacctt 397



 Score = 54.0 bits (27), Expect = 9e-07
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                       
Query: 1865 atcaggtggaggtcgaatgaatgtcactatggaccgttatgag 1907
            ||||||||||||||| ||| ||||||| ||||| |||||||||
Sbjct: 4    atcaggtggaggtcgcatgtatgtcacaatggatcgttatgag 46