Miyakogusa Predicted Gene

chr3.CM0590.180.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr3.CM0590.180.nc
         (7876 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AV420082  MWM177c01_r                                                  66   3e-10
AV428361  MWM096a10_r                                                  64   1e-09

>AV420082  MWM177c01_r;
          Length = 251

 Score = 65.9 bits (33), Expect = 3e-10
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 4656 caacaataacaacaacaaaagccttgtcctactaagtgaggtcggctat 4704
            |||||| ||||| |||||||||||| ||| |||||||||||||||||||
Sbjct: 149  caacaacaacaataacaaaagccttatcccactaagtgaggtcggctat 101


>AV428361  MWM096a10_r;
          Length = 302

 Score = 63.9 bits (32), Expect = 1e-09
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                        
Query: 4663 aacaacaacaaaagccttgtcctactaagtgaggtcggctatatgaatcaccctatgcca 4722
            ||||| |||||||||||  |||  ||||||||||||||||||||| ||||| | | ||| 
Sbjct: 29   aacaagaacaaaagcctcatccccctaagtgaggtcggctatatggatcacacgacgccc 88

                            
Query: 4723 ttgcgctcgataaaaa 4738
            ||||||||||| ||||
Sbjct: 89   ttgcgctcgatcaaaa 104