Miyakogusa Predicted Gene

chr3.CM0292.380.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr3.CM0292.380.nc
         (7426 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AV412624  MWM221h12_r                                                  90   2e-17

>AV412624  MWM221h12_r;
          Length = 400

 Score = 89.7 bits (45), Expect = 2e-17
 Identities = 102/117 (87%), Gaps = 3/117 (2%)
 Strand = Plus / Plus

                                                                        
Query: 3982 tattagaatttgggaggccta-actcaacc-cagaagctagctcaagagttgagggttgc 4039
            |||||||| || || |||||| |||||||| || ||||||||||||||||||||| ||||
Sbjct: 99   tattagaaattagggggcctatactcaaccacaaaagctagctcaagagttgaggtttgc 158

                                                                     
Query: 4040 tctaccctttatagaggctatatatgccatatctctagccaatgtgggacttctaac 4096
             | ||| |||||| || |||| |||||  ||||||||||||||||||||||||||||
Sbjct: 159  acaacc-tttataaagactatctatgctctatctctagccaatgtgggacttctaac 214



 Score = 63.9 bits (32), Expect = 1e-09
 Identities = 55/60 (91%), Gaps = 2/60 (3%)
 Strand = Plus / Plus

                                                                        
Query: 3982 tattagaatttgggaggccta-actcaacc-cagaagctagctcaagagttgagggttgc 4039
            |||||||| |||||||||||| |||||||| || ||||||||||||||||||||| ||||
Sbjct: 325  tattagaaattgggaggcctatactcaaccacaaaagctagctcaagagttgaggtttgc 384