Miyakogusa Predicted Gene
- chr3.CM0111.220.nc
BLASTN 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= chr3.CM0111.220.nc
(3759 letters)
Database: lotus_5dash_unigene
7353 sequences; 3,026,947 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
R_KMC000820A_C01 R_KMC000820A_c01 500 e-141
AV419885 MWM175f01_r 44 6e-04
>R_KMC000820A_C01 R_KMC000820A_c01
Length = 454
Score = 500 bits (252), Expect = e-141
Identities = 252/252 (100%)
Strand = Plus / Plus
Query: 444 actccactcgctctaactctaactttctgtttgtttcccgagaaaatcaaaataacaatg 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 actccactcgctctaactctaactttctgtttgtttcccgagaaaatcaaaataacaatg 262
Query: 504 tcgcattcctcgggaaaacccgtttccgacgtcatcgggttcaacaaaccggatttccga 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tcgcattcctcgggaaaacccgtttccgacgtcatcgggttcaacaaaccggatttccga 322
Query: 564 gagctcgatctaggttcccccgtttcgccattgcgaacgcgcggacccgccgccgccagc 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gagctcgatctaggttcccccgtttcgccattgcgaacgcgcggacccgccgccgccagc 382
Query: 624 agcagttctggctcatccggatcgttctccggtggtcgaaacccggttcctagaagatcc 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agcagttctggctcatccggatcgttctccggtggtcgaaacccggttcctagaagatcc 442
Query: 684 gattccggcgag 695
||||||||||||
Sbjct: 443 gattccggcgag 454
Score = 190 bits (96), Expect = 4e-48
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 283 agaaacaaagaaaagctttattctctctctaagaattcattcattctttacttgctcact 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 agaaacaaagaaaagctttattctctctctaagaattcattcattctttacttgctcact 101
Query: 343 cattttatatcacgagatccccatcccatcccatcc 378
||||||||||||||||||||||||||||||||||||
Sbjct: 102 cattttatatcacgagatccccatcccatcccatcc 137
>AV419885 MWM175f01_r;
Length = 108
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 2391 tgggaaagatcaattgaagactccaaccgagctttacatatccaaccaaattacacgaaa 2450
||||||| |||||||||||| ||||| | ||| ||| | || ||||||||||| | ||||
Sbjct: 37 tgggaaaaatcaattgaagattccaatcaagccttaaacattcaaccaaattatatgaaa 96
Query: 2451 gc 2452
||
Sbjct: 97 gc 98