Miyakogusa Predicted Gene

chr2.CM0641.310.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr2.CM0641.310.nc
         (9238 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

R_KMC001362A_C01 R_KMC001362A_c01                                     301   4e-81

>R_KMC001362A_C01 R_KMC001362A_c01
          Length = 388

 Score =  301 bits (152), Expect = 4e-81
 Identities = 152/152 (100%)
 Strand = Plus / Plus

                                                                       
Query: 214 agaaatcgtgataaatcacacaagacaatttccctcattctctattccactctttctagg 273
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agaaatcgtgataaatcacacaagacaatttccctcattctctattccactctttctagg 60

                                                                       
Query: 274 gtttcttcccattcaatctcttctcctctttacccttcgatttctcatctacacaccact 333
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtttcttcccattcaatctcttctcctctttacccttcgatttctcatctacacaccact 120

                                           
Query: 334 tcgcaaccctcaatttcctcatctgcaatcgg 365
           ||||||||||||||||||||||||||||||||
Sbjct: 121 tcgcaaccctcaatttcctcatctgcaatcgg 152



 Score =  216 bits (109), Expect = 2e-55
 Identities = 109/109 (100%)
 Strand = Plus / Plus

                                                                       
Query: 711 ctgggtgctaattattctgggagttccgttggaggccatgatgttactcaacattccgtg 770
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ctgggtgctaattattctgggagttccgttggaggccatgatgttactcaacattccgtg 339

                                                            
Query: 771 gcttcgaggcattcagcgatattaggtgggcaacaggaagttgatgttg 819
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gcttcgaggcattcagcgatattaggtgggcaacaggaagttgatgttg 388



 Score =  149 bits (75), Expect = 3e-35
 Identities = 111/129 (86%)
 Strand = Plus / Plus

                                                                       
Query: 453 ggattcaatcgccctcttttcatgtgaagaagaagaaggagcgacgacatgtattcatcc 512
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 ggattcaatcgccctcttttcatgtgaagaagaagaaggagcgacgacatgtattcatcc 210

                                                                       
Query: 513 agaggtannnnnnnnnnnnnnnnnncttacggccaatcgtacacgggtcaatccacatac 572
           |||||||                  |||||||||||||||||||||||||||||||||||
Sbjct: 211 agaggtagcggcggcggcggcggcgcttacggccaatcgtacacgggtcaatccacatac 270

                    
Query: 573 ggccagaac 581
           |||||||||
Sbjct: 271 ggccagaac 279