Miyakogusa Predicted Gene

chr2.CM0304.1000.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr2.CM0304.1000.nc
         (4699 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AV429062  MWM119h05_r                                                 285   1e-76

>AV429062  MWM119h05_r;
          Length = 332

 Score =  285 bits (144), Expect = 1e-76
 Identities = 150/152 (98%)
 Strand = Plus / Plus

                                                                        
Query: 2100 gatctcttcaacaccttcagtacatgtgtagttctgatgatagtacggaaagggacaaca 2159
            ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 4    gatctcttcaacaccttcagtacatgtgtagatgtgatgatagtacggaaagggacaaca 63

                                                                        
Query: 2160 aaggatcaaatgtcaattgtgatgaaatcaagcatcaaaacagtaatacaagttcagaaa 2219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64   aaggatcaaatgtcaattgtgatgaaatcaagcatcaaaacagtaatacaagttcagaaa 123

                                            
Query: 2220 tagcaaatgactgtcaagacaagggtcaaaag 2251
            ||||||||||||||||||||||||||||||||
Sbjct: 124  tagcaaatgactgtcaagacaagggtcaaaag 155



 Score =  232 bits (117), Expect = 1e-60
 Identities = 132/137 (96%)
 Strand = Plus / Plus

                                                                        
Query: 2370 agagttccaagccttttaaatggccagatgctgctgtttcagccatagttgctcttgaaa 2429
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154  agagttccaagccttttaaatggccagatgctgctgtttcagccatagttgctcttgaaa 213

                                                                        
Query: 2430 aagcttcacatgatgctttctcatcagattttcagaagtataaccaaaagttacggcaat 2489
            |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||  ||
Sbjct: 214  aagcttcacaagatgctttctcataagattttcagaagtataaccaaaagttacgggcat 273

                             
Query: 2490 taacttttaatctcaag 2506
            ||||||||||| |||||
Sbjct: 274  taacttttaatttcaag 290



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 43/44 (97%)
 Strand = Plus / Plus

                                                        
Query: 3022 agaacaatgcattcctagctcgtcgtctattaaatggagagctg 3065
            ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 289  agaacaatgcattcctagctcgtcgtctaataaatggagagctg 332