Miyakogusa Predicted Gene

chr2.CM0249.1160.nc
Show Alignment:  
BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr2.CM0249.1160.nc
         (3775 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AV417532  MWM145b06_r                                                 127   5e-29

>AV417532  MWM145b06_r;
          Length = 246

 Score =  127 bits (64), Expect = 5e-29
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2073 gcagtttgctgaactgatacagcccattgagaaaaggacacatgaagtcgaagctttcat 2132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131  gcagtttgctgaactgatacagcccattgagaaaaggacacatgaagtcgaagctttcat 190

                
Query: 2133 aaag 2136
            ||||
Sbjct: 191  aaag 194



 Score =  117 bits (59), Expect = 5e-26
 Identities = 68/72 (94%)
 Strand = Plus / Plus

                                                                       
Query: 715 gcttcagcgcagttggccaggcgtcggattgtgattggagtttgtgacggccctatgctt 774
           |||||||||||||||||||| | |  ||||||||||||||||||||||||||||||||||
Sbjct: 63  gcttcagcgcagttggccagncttnngattgtgattggagtttgtgacggccctatgctt 122

                       
Query: 775 gcaaagaagcag 786
           ||||||||||||
Sbjct: 123 gcaaagaagcag 134



 Score =  107 bits (54), Expect = 5e-23
 Identities = 54/54 (100%)
 Strand = Plus / Plus

                                                                  
Query: 2556 agtctatcaagccagatttggaagtgcaagctgtaccaatcacagatccgtatg 2609
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193  agtctatcaagccagatttggaagtgcaagctgtaccaatcacagatccgtatg 246



 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 49/49 (100%)
 Strand = Plus / Plus

                                                            
Query: 559 aagctgttgttaacggcggcacctttgaccgattgcacgacggccaccg 607
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aagctgttgttaacggcggcacctttgaccgattgcacgacggccaccg 49