Miyakogusa Predicted Gene

chr2.CM0065.210.nc
Show Alignment: 

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr2.CM0065.210.nc
         (2548 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AV428808  MWM067b07_r                                                 765   0.0  
AV410246  MWL069h07_r                                                 278   1e-74

>AV428808  MWM067b07_r;
          Length = 411

 Score =  765 bits (386), Expect = 0.0
 Identities = 405/410 (98%), Gaps = 1/410 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1174 ctataaagagccgtagtgataagcagcttgtttctcatgatacaaagagtaatgaataca 1233
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    ctataaagagccgtagagataagcagcttgtttctcatgatacaaagagtaatgaataca 61

                                                                        
Query: 1234 actacaaacatacattttctgttgaaatcagccccatttgccgtgaggatttaatctgtc 1293
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   actacaaacatacattttctgttgaaatcagccccatttgccgtgaggatttaatctgtc 121

                                                                        
Query: 1294 tgcctcctaaagttgctctaagtttgggaaatcttggcccaattgtgatttgcactaagg 1353
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  tgcctcctaaagttgctctaagtttgggaaatcttggcccaattgtgatttgcactaagg 181

                                                                        
Query: 1354 ttaccaacagcattgctttgcttgatccattcaccttgaggtactgtttcttagatgctg 1413
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  ttaccaacagcattgctttgcttgatccattcaccttgaggtactgtttcttagatgctg 241

                                                                        
Query: 1414 atcagtattggaggtcatccttcaagtctttacttactagcagacagttagtggagtata 1473
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242  atcagtattggaggtcatccttcaagtctttacttactagcagacagttagtggagtata 301

                                                                        
Query: 1474 tagtcctggatgtggaggttgtgtcatctgaggttac-tgttggtggcacgaaatatgtt 1532
            ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||
Sbjct: 302  tagtcctggatgtggaggttgtgtcatctgaggttacatggaggtggcacgaaatatgtt 361

                                                              
Query: 1533 ttagctgatgcccaagtggctcgtgtgtcagattttggaaagaatgacac 1582
            |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 362  ttagctgatgcccaagaggctcgtgtgtcagattttggaaagaatgacac 411


>AV410246  MWL069h07_r;
          Length = 426

 Score =  278 bits (140), Expect = 1e-74
 Identities = 185/200 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1864 taaaggatctggaagaaaaccccgacctgaggttcaacatatcactgtaccgaaataaag 1923
            |||| ||||||||||||||||| ||||||||||||||| |||||||||||| ||||| ||
Sbjct: 1    taaatgatctggaagaaaaccctgacctgaggttcaacctatcactgtaccaaaatatag 60

                                                                        
Query: 1924 agtaccagccatcagagatagcatcagtgactgatggggaagagcttccttctgttcccc 1983
            ||| ||||||||||||||| ||||| |||||||||||||||||||| ||||||||||| |
Sbjct: 61   agttccagccatcagagatggcatctgtgactgatggggaagagctaccttctgttccac 120

                                                                        
Query: 1984 tggaggagctactggctgatcttgagctgggtgaggacgaagatgaggaggacgacatga 2043
            |||||||| |||||||||||||||||||||||||||| |||||||||||||||  |||||
Sbjct: 121  tggaggagttactggctgatcttgagctgggtgaggatgaagatgaggaggacttcatga 180

                                
Query: 2044 tggaataaacaaaagcagct 2063
            |||||||||||| |||||||
Sbjct: 181  tggaataaacaatagcagct 200