Miyakogusa Predicted Gene

chr2.CM0031.340.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr2.CM0031.340.nc
         (8120 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AV408822  MWL047e02_r                                                 605   e-172
AV428361  MWM096a10_r                                                  56   3e-07

>AV408822  MWL047e02_r;
          Length = 350

 Score =  605 bits (305), Expect = e-172
 Identities = 335/350 (95%)
 Strand = Plus / Plus

                                                                       
Query: 22  acatcaccttcactctcactctctgtcctcacaaaccctaaatactcatccttcttctgc 81
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   acatcaccttcactctcactctctgtcctcacaaaccctaaatactcatccttcttctgc 60

                                                                       
Query: 82  aacactcacacagactgacccaactctttctttcaccaaaacttgcctaaaggaaccatt 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aacactcacacagactgacccaactctttctttcaccaaaacttgcctaaaggaaccatt 120

                                                                       
Query: 142 ttgacgcatacccacatgaatttttcactttttcagctcatgattcacgtgctcaatacc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgacgcatacccacatgaatttttcactttttcagctcatgattcacgtgctcaatacc 180

                                                                       
Query: 202 attgcttcaactacctgctgaaagtttcaatctttttcatattccctagtgtttcttgtc 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attgcttcaactacctgctgaaagtttcaatctttttcatattccctagtgtttcttgtc 240

                                                                       
Query: 262 aacttctgagtacccatttgagtgtttgtttgtttgattgatcaaagtcaannnnnnnnn 321
           |||||||||||||||||||||||||||||||||||||||||||||||||||         
Sbjct: 241 aacttctgagtacccatttgagtgtttgtttgtttgattgatcaaagtcaattttttttt 300

                                                             
Query: 322 nnnnnnggaatttggtacttgaggtttatagggtgagggaatcttggtat 371
                 ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttttttggaatttggtacttgaggtttatagggtgagggaatcttggtat 350


>AV428361  MWM096a10_r;
          Length = 302

 Score = 56.0 bits (28), Expect = 3e-07
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                        
Query: 955  acaaaatttggtttttgatcgagctgaatgacgtagtatgatcgatatagccgatctcac 1014
            ||||||||||| ||||||||||||  || | ||| || ||||| |||||||||| |||||
Sbjct: 116  acaaaatttggattttgatcgagcgcaagggcgtcgtgtgatccatatagccgacctcac 57

                
Query: 1015 ttag 1018
            ||||
Sbjct: 56   ttag 53