Miyakogusa Predicted Gene

chr2.CM0021.740.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr2.CM0021.740.nc
         (4469 letters)

Database: lotus_5dash_unigene 
           7353 sequences; 3,026,947 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AV406995  MWL013f07_r                                                 105   2e-22

>AV406995  MWL013f07_r;
          Length = 281

 Score =  105 bits (53), Expect = 2e-22
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                       
Query: 648 aaatggttaaacatcaagcctaaggtgaatgattttagtgaagatgaagttgacactgaa 707
           |||||||| || || ||||| |||||| |||||||||||||||||||||| |||||||||
Sbjct: 4   aaatggttgaatataaagccaaaggtgtatgattttagtgaagatgaagtggacactgaa 63

                            
Query: 708 actgagagtgaagatga 724
           |||||||||||||||||
Sbjct: 64  actgagagtgaagatga 80



 Score = 99.6 bits (50), Expect = 1e-20
 Identities = 59/62 (95%)
 Strand = Plus / Plus

                                                                        
Query: 1136 agacaccgaagaggaaaatcagaaactctgcgtgctcagtacataaaaactaaggaagtg 1195
            |||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 197  agacacagaagaggaaactcagaaactctgcgtgctcagtacataaatactaaggaagtg 256

              
Query: 1196 ag 1197
            ||
Sbjct: 257  ag 258



 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 53/59 (89%), Gaps = 1/59 (1%)
 Strand = Plus / Plus

                                                                      
Query: 807 agcttgctctcctaaagcttcaagaat-ggctgcgtgtgaagataatccacttagaaca 864
           ||||||||||||||||||||||||||| || || | |||||||||||||| | ||||||
Sbjct: 81  agcttgctctcctaaagcttcaagaatgggatgtgcgtgaagataatccattaagaaca 139